RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CACNA1BQ00975 2339 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 PRR14LQ5THK1 2151 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 A0A1W2PQ09 198 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 LRP5LA4QPB2 252 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 METTL21EPA6NDL7 271 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 TUBAL3A6NHL2 446 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 ZSCAN5BA6NJL1 495 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 TMEM210A6NLX4 147 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 SHISA9B4DS77 424 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 H0YL77 283 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 J3QT63 122 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 RAB27BO00194 218 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 SIAH2O43255 324 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 GSTZ1O43708 216 aaPredicted RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 ZNF780AO75290 641 aaPredicted RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 SCGNO76038 276 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 TPPPO94811 219 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 CD3EP07766 207 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 SFTPBP07988 381 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 MPZP25189 248 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 MRPS10P82664 201 aaKnown RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 DGCR2P98153 550 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 IL24Q13007 206 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 ZNF154Q13106 437 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 GPR176Q14439 515 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 ADIPOQQ15848 244 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 FAM189A2Q15884 450 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 MOGAT2Q3SYC2 334 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 RNASE12Q5GAN4 147 aaKnown RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 BEX5Q5H9J7 111 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 FAM76BQ5HYJ3 339 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 TRIQKQ629K1 86 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 RAB12Q6IQ22 244 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 HAGHLQ6PII5 290 aaPredicted RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 TMEM200AQ86VY9 491 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 ZNF573Q86YE8 665 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 SAXO1Q8IYX7 474 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 OR8H2Q8N162 312 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 C15orf40Q8WUR7 153 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 GTF3AQ92664 365 aaKnown RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 GCDHQ92947 438 aaPredicted RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 SLAMF9Q96A28 289 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 PHF21AQ96BD5 680 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 Q96M66 194 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 URM1Q9BTM9 101 aaKnown RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 TM2D1Q9BX74 207 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 PKIBQ9C010 78 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 OR51I2Q9H344 312 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 AUNIPQ9H7T9 357 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 ELL3Q9HB65 397 aaPredicted RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 MSL2Q9HCI7 577 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 DIABLOQ9NR28 239 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 TMEM100Q9NV29 134 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 POU2F3Q9UKI9 436 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 MRPS7Q9Y2R9 242 aaKnown RBP5.66□□□□□ -1.5
VPS41-204ENST00000413141 ATP23Q9Y6H3 246 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 NBASA2RRP1 2371 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 HIVEP3Q5T1R4 2406 aa5.66□□□□□ -1.5
VPS41-204ENST00000413141 MYO7BQ6PIF6 2116 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 ANKHD1Q8IWZ3 2542 aaKnown RBP5.65□□□□□ -1.5
VPS41-204ENST00000413141 TRAV18A0A075B6X5 111 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 PLSCR5A0PG75 271 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 ISPDA4D126 451 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 WIPF3A6NGB9 483 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 FOXI3A8MTJ6 420 aaPredicted RBP5.65□□□□□ -1.5
VPS41-204ENST00000413141 DEFB108AA8MXU0 73 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 F5H5P2 479 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 GABARAPH6UMI1 98 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 SYNGR1O43759 233 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 LANCL1O43813 399 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 HTR3BO95264 441 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 CYB5AP00167 134 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 CSTBP04080 98 aaKnown RBP5.65□□□□□ -1.5
VPS41-204ENST00000413141 CHRM2P08172 466 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 CD3GP09693 182 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 PTHLHP12272 177 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 GTF2F2P13984 249 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 BCL3P20749 454 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 CPT2P23786 658 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 LOXP28300 417 aaPredicted RBP5.65□□□□□ -1.5
VPS41-204ENST00000413141 CD200P41217 278 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 NPBWR2P48146 333 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 VEGFCP49767 419 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 RBM11P57052 281 aaKnown RBP5.65□□□□□ -1.5
VPS41-204ENST00000413141 SELENOVP59797 346 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 MAB21L1Q13394 359 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 RGS21Q2M5E4 152 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 PIGYQ3MUY2 71 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 ELP2Q6IA86 826 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 DNM1P46Q6ZS02 220 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 RTN4RL2Q86UN3 420 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 MKXQ8IYA7 352 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 BATF2Q8N1L9 274 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 OSR2Q8N2R0 312 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 FAM89BQ8N5H3 189 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 SPERTQ8NA61 448 aa5.65□□□□□ -1.5
VPS41-204ENST00000413141 Q8NFD4 153 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms