RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 PKMYT1Q99640 499 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 LAMP3Q9UQV4 416 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 MN1Q10571 1320 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-203ENST00000409672 CYC1P08574 325 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 NAT2P11245 290 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 MRGPREQ86SM8 312 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 LHX4Q969G2 390 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 TMEM56Q96MV1 263 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 SPTY2D1-AS1A0A0U1RR47 76 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 TRABD2BA6NFA1 517 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 PPP5D1E7EU14 171 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ST8SIA5O15466 376 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 PTTG1O95997 202 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 MGMTP16455 207 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 CAMPP49913 170 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 NHLH1Q02575 133 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 NHLH2Q02577 135 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 DGAT2L6Q6ZPD8 337 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 OR52N1Q8NH53 320 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF596Q8TC21 504 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 MTCH2Q9Y6C9 303 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 A0A087WZY1 265 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 UPK1AO00322 258 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 GNG7O60262 68 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 HLA-GP17693 338 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 BRS3P32247 399 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 SULT1A1P50225 295 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 TPBGQ13641 420 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 ADAMTS17Q8TE56 1095 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 CACNA1GO43497 2377 aa7.52□□□□□ -1.21
SCN9A-203ENST00000409672 RALGAPA1Q6GYQ0 2036 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ANKUB1A6NFN9 424 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 GEMIN2O14893 280 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 USF1P22415 310 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CD80P33681 288 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF137PP52743 207 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 FGF8P55075 233 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 TMEM215Q68D42 235 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 FAM71E1Q6IPT2 247 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 RNF141Q8WVD5 230 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 MCHR2Q969V1 340 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 MS4A10Q96PG2 267 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 PRRX2Q99811 253 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 PIGMQ9H3S5 423 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ZMIZ1Q9ULJ6 1067 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 PLXNB2O15031 1838 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 PTBP3O95758 552 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CPN1P15169 458 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 SAXO2Q658L1 398 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 SH2D5Q6ZV89 423 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 EDARADDQ8WWZ3 215 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ZMAT5Q9UDW3 170 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 R4GMQ9 66 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ETHE1O95571 254 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 OR5AL1P0C617 328 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ETFDHQ16134 617 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 KIRREL2Q6UWL6 708 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 C11orf44Q8N8P7 122 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 APOBEC3DQ96AK3 386 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 MOB1AQ9H8S9 216 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CNOT2Q9NZN8 540 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 POMT2Q9UKY4 750 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 DOCK9Q9BZ29 2069 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 GCSHP23434 173 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ACP1P24666 158 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CCL8P80075 99 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 SLC35D3Q5M8T2 416 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CENPVQ7Z7K6 275 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 DRAXINQ8NBI3 349 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF486Q96H40 463 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 WNT16Q9UBV4 365 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 VAMP5O95183 116 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ZDHHC11BP0C7U3 371 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 PSMB1P20618 241 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CDK5Q00535 292 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CALHM3Q86XJ0 350 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 OR4D9Q8NGE8 314 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 C1QTNF3Q9BXJ4 246 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 TRAV39A0A0B4J263 110 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ST8SIA3O43173 380 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 TCRBP04435 133 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 SCG5P05408 212 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ATP5J2P56134 94 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 GNG3P63215 75 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 KLK4Q9Y5K2 254 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ETV7Q9Y603 341 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CD1EP15812 388 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CNN1P51911 297 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 RPL30P62888 115 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 MRPL37Q9BZE1 423 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 MBD1Q9UIS9 605 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 UMAD1C9J7I0 102 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 MT-ND4LP03901 98 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 CTXN2P0C2S0 81 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 FUT6P51993 359 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 GFRA1P56159 465 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 LSAMPQ13449 338 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF239Q16600 458 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 FDX2Q6P4F2 183 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 Q6ZSR9 355 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms