RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 OR12D2P58182 307 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BDP58876 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 TAS2R38P59533 333 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 PFN3P60673 137 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 DCAF7P61962 342 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 RPS13P62277 151 aaKnown RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BCP62807 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 COL10A1Q03692 680 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 ZNF85Q03923 595 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 GGTLC2Q14390 218 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 OR7A5Q15622 319 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST2H2BEQ16778 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 EIPR1Q53HC9 387 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 SOHLH1Q5JUK2 328 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 FBXL22Q6P050 247 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 ARHGAP11AQ6P4F7 1023 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 INO80CQ6PI98 192 aaPredicted RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 TMEM150AQ86TG1 271 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 RBM45Q8IUH3 476 aaKnown RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 ARL14EPQ8N8R7 260 aaPredicted RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 OR8G5Q8NG78 346 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 OR9K2Q8NGE7 335 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 OR4D11Q8NGI4 311 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 SFXN5Q8TD22 340 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 RPS4Y2Q8TD47 263 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 CD300LFQ8TDQ1 290 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 GPX8Q8TED1 209 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 NPRL2Q8WTW4 380 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 METTL21AQ8WXB1 218 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BHQ93079 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 C5orf34Q96MH7 638 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 TGM7Q96PF1 710 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 SCGB3A2Q96PL1 93 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 F2RL3Q96RI0 385 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 INTS14Q96SY0 518 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BNQ99877 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BMQ99879 126 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 ZNF2Q9BSG1 426 aaPredicted RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 SNHG12Q9BXW3 62 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 EIF5A2Q9GZV4 153 aaKnown RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 COMMD4Q9H0A8 199 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 SLC25A18Q9H1K4 315 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 ADGRL4Q9HBW9 690 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 RAB18Q9NP72 206 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 CNIH4Q9P003 139 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 ZNF230Q9UIE0 474 aaPredicted RBP4.79□□□□□ -1.64
CLK1-202ENST00000409403 GNG8Q9UK08 70 aa4.79□□□□□ -1.64
CLK1-202ENST00000409403 MED13Q9UHV7 2174 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 ABCA7Q8IZY2 2146 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 BORCS7-ASMTA0A0B4J1R7 106 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 TCRBV21S2A2A0A5A6 115 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 TMEM235A6NFC5 223 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 LRRC3CA6NJW4 275 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 HSPB2A8KAH6 182 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 ZNF736B4DX44 427 aaPredicted RBP4.78□□□□□ -1.64
CLK1-202ENST00000409403 K7EPK0 472 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 HCRTR2O43614 444 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 NUDT21O43809 227 aaKnown RBP4.78□□□□□ -1.64
CLK1-202ENST00000409403 SCGNO76038 276 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 FSHBP01225 129 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 CD3DP04234 171 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 ARG1P05089 322 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 LGALS2P05162 132 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 SNRPCP09234 159 aaKnown RBP4.78□□□□□ -1.64
CLK1-202ENST00000409403 OR5H8P0DN80 308 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 GZMBP10144 247 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 CD37P11049 281 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 FCGR2AP12318 317 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 FOLR1P15328 257 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 BCKDHBP21953 392 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 HOXD9P28356 352 aaPredicted RBP4.78□□□□□ -1.64
CLK1-202ENST00000409403 GPR4P46093 362 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 ELLP55199 621 aaPredicted RBP4.78□□□□□ -1.64
CLK1-202ENST00000409403 PLA2G7Q13093 441 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 LASP1Q14847 261 aaKnown RBP4.78□□□□□ -1.64
CLK1-202ENST00000409403 ARHGAP19Q14CB8 494 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 ELOCQ15369 112 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 HSPB2Q16082 182 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 NKAIN1Q4KMZ8 207 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 LEMD1Q68G75 181 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 ULK3Q6PHR2 472 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 PARM1Q6UWI2 310 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 CD300LGQ6UXG3 332 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 TMEM64Q6YI46 380 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 SSX7Q7RTT5 188 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 FAM220AQ7Z4H9 259 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 WDR5BQ86VZ2 330 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 ZNF584Q8IVC4 421 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 ZNF664Q8N3J9 261 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 JAGN1Q8N5M9 183 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 FAM71E2Q8N5Q1 922 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 OR51F2Q8NH61 342 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 GPR148Q8TDV2 347 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 NTNG2Q96CW9 530 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 WDR34Q96EX3 536 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 PELI1Q96FA3 418 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 PRAP1Q96NZ9 151 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 IP6K3Q96PC2 410 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 HIST1H2BLQ99880 126 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms