RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CD79AP11912 226 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 HNF1AP20823 631 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 TMEM50BP56557 158 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 POLR2GP62487 172 aaKnown RBP eCLIP7.33□□□□□ -1.24
SNX13-201ENST00000409076 TESK1Q15569 626 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 TMEM128Q5BJH2 165 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 PLXDC1Q8IUK5 500 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 NAXDQ8IW45 347 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 ZNF488Q96MN9 340 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 EMC3Q9P0I2 261 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 CLDN16Q9Y5I7 305 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 A0A1B0GX78 115 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 GEMIN2O14893 280 aaKnown RBP7.33□□□□□ -1.24
SNX13-201ENST00000409076 FLI1Q01543 452 aaPredicted RBP7.33□□□□□ -1.24
SNX13-201ENST00000409076 C3AR1Q16581 482 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.33□□□□□ -1.24
SNX13-201ENST00000409076 TMEM268Q5VZI3 342 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 FIP1L1Q6UN15 594 aaKnown RBP7.33□□□□□ -1.24
SNX13-201ENST00000409076 HIST2H3AQ71DI3 136 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 ASB10Q8WXI3 467 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 ADIPOR1Q96A54 375 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 RHOVQ96L33 236 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 PFDN5Q99471 154 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 SLC19A3Q9BZV2 496 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 IFT22Q9H7X7 185 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 GHRLQ9UBU3 117 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 ZMAT5Q9UDW3 170 aaKnown RBP7.33□□□□□ -1.24
SNX13-201ENST00000409076 HSF4Q9ULV5 492 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 NUP210Q8TEM1 1887 aaPredicted RBP7.33□□□□□ -1.24
SNX13-201ENST00000409076 ALG1L2C9J202 215 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 IFNA2P01563 188 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 ZNF728P0DKX0 622 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 PTGER4P35408 488 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 C17orf67Q0P5P2 114 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 PJVKQ0ZLH3 352 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 DHRS11Q6UWP2 260 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.33□□□□□ -1.24
SNX13-201ENST00000409076 UBAC2Q8NBM4 344 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 OR10S1Q8NGN2 331 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 RTN4IP1Q8WWV3 396 aaPredicted RBP7.33□□□□□ -1.24
SNX13-201ENST00000409076 PIGQQ9BRB3 760 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 MRI1Q9BV20 369 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 GLS2Q9UI32 602 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 MCTS1Q9ULC4 181 aaKnown RBP7.33□□□□□ -1.24
SNX13-201ENST00000409076 KCNIP3Q9Y2W7 256 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 LHFPL6Q9Y693 200 aa7.33□□□□□ -1.24
SNX13-201ENST00000409076 M0R135 149 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 MMP9P14780 707 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 P2RY4P51582 365 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 B2MP61769 119 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 SNAI3Q3KNW1 292 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 SDSLQ96GA7 329 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 ZNF799Q96GE5 643 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 NRIP2Q9BQI9 281 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 CNTNAP3Q9BZ76 1288 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 CALHM2Q9HA72 323 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 MED9Q9NWA0 146 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 IGHV1OR21-1A0A087WYE8 117 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 A6NIZ1 184 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 DUS4LO95620 317 aaKnown RBP7.32□□□□□ -1.24
SNX13-201ENST00000409076 MEOX2P50222 304 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 RAP1BP61224 184 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 RAP1AP62834 184 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 TMEM267Q0VDI3 215 aaPredicted RBP7.32□□□□□ -1.24
SNX13-201ENST00000409076 KIAA0141Q14154 515 aaPredicted RBP7.32□□□□□ -1.24
SNX13-201ENST00000409076 SLC25A26Q70HW3 274 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 SUMF2Q8NBJ7 301 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 OR9K2Q8NGE7 335 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 OR52M1Q8NGK5 317 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 OR1K1Q8NGR3 316 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 OR2G3Q8NGZ4 309 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 RNF126Q9BV68 326 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 RARRES3Q9UL19 164 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 CXorf51AA0A1B0GTR3 108 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 EFNA2O43921 213 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 SFT2D2O95562 160 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 SELEP16581 610 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 GALNSP34059 522 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 HOXA4Q00056 320 aaPredicted RBP7.32□□□□□ -1.24
SNX13-201ENST00000409076 SMAD4Q13485 552 aaKnown RBP7.32□□□□□ -1.24
SNX13-201ENST00000409076 ZNF695Q8IW36 515 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 MRGPRFQ96AM1 343 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 C12orf49Q9H741 205 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 UNKLQ9H9P5 680 aaKnown RBP7.32□□□□□ -1.24
SNX13-201ENST00000409076 PCOLCE2Q9UKZ9 415 aa7.32□□□□□ -1.24
SNX13-201ENST00000409076 ZNF705GA8MUZ8 300 aaPredicted RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 CXCL13O43927 109 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 S100PP25815 95 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 GLP1RP43220 463 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 TGFBR3Q03167 851 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 CFHR1Q03591 330 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 UBE2V2Q15819 145 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 GUK1Q16774 197 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 FAM209BQ5JX69 171 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 ZNF468Q5VIY5 522 aaPredicted RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 ZNF813Q6ZN06 617 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 ZNF519Q8TB69 540 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 GLYATL2Q8WU03 294 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 TMEM230Q96A57 120 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 CRLF2Q9HC73 371 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms