RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 DGAT2L7PQ6IED9 249 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 VWA1Q6PCB0 445 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 LILRA5A6NI73 299 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 SP1P08047 785 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 FUT3P21217 361 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 FAM3AP98173 230 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 DHRS11Q6UWP2 260 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 EIF4E3Q8N5X7 224 aaKnown RBP10.81□□□□□ -0.68
SMCR8-201ENST00000406438 AKR7LQ8NHP1 331 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 SLC26A1Q9H2B4 701 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 CEACAM3P40198 252 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 TEX101Q9BY14 249 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 M0R1X1 148 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 BLNKQ8WV28 456 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 BCL2L10Q9HD36 194 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 NME1P15531 152 aaKnown RBP10.81□□□□□ -0.68
SMCR8-201ENST00000406438 B3GNTL1Q67FW5 361 aaPredicted RBP10.81□□□□□ -0.68
SMCR8-201ENST00000406438 UQCC3Q6UW78 93 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 LYG1Q8N1E2 194 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 OR4C16Q8NGL9 310 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 FAM24AA6NFZ4 105 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 FAM90A27PA6NNH2 459 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 CDX4O14627 284 aaPredicted RBP10.81□□□□□ -0.68
SMCR8-201ENST00000406438 GATCO43716 136 aaKnown RBP10.81□□□□□ -0.68
SMCR8-201ENST00000406438 RBPMS2Q6ZRY4 209 aaKnown RBP10.81□□□□□ -0.68
SMCR8-201ENST00000406438 OR1L1Q8NH94 360 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 H3BP45 60 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 BCL2L11O43521 198 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 NAT1P18440 290 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 SPCS3P61009 180 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 HLA-BQ31612 363 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.81□□□□□ -0.68
SMCR8-201ENST00000406438 B9D1Q9UPM9 204 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 POMT1Q9Y6A1 747 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 TMEM215Q68D42 235 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 NPEPL1Q8NDH3 523 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 AP5S1Q9NUS5 200 aa10.81□□□□□ -0.68
SMCR8-201ENST00000406438 ADAMTSL3P82987 1691 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 ALG1L2C9J202 215 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 PCBP3P57721 371 aaKnown RBP10.8□□□□□ -0.68
SMCR8-201ENST00000406438 ZNF260Q3ZCT1 412 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 RNF212Q495C1 297 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 MIDNQ504T8 468 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 BAP18Q8IXM2 172 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 OR52L2PQ8NGH6 319 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 CCL17Q92583 94 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 SIGLEC11Q96RL6 698 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 SLC22A13Q9Y226 551 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 TMED3Q9Y3Q3 217 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 GPANK1O95872 356 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 UBE2MP61081 183 aaKnown RBP10.8□□□□□ -0.68
SMCR8-201ENST00000406438 PRSS36Q5K4E3 855 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 OR10V1Q8NGI7 309 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 UBR3Q6ZT12 1888 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 BRCA1P38398 1863 aaKnown RBP10.8□□□□□ -0.68
SMCR8-201ENST00000406438 A0A0A6YYD5 115 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 BMPR1BO00238 502 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 KLF3P57682 345 aaPredicted RBP10.8□□□□□ -0.68
SMCR8-201ENST00000406438 CLEC12BQ2HXU8 276 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 MMP26Q9NRE1 261 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 TNRC6CQ9HCJ0 1690 aaKnown RBP10.8□□□□□ -0.68
SMCR8-201ENST00000406438 CST7O76096 145 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 CCKARP32238 428 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMCR8-201ENST00000406438 CADM3Q8N126 398 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 UFC1Q9Y3C8 167 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 NHSL1Q5SYE7 1610 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 IGLV3-27P01718 113 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 TRA2AQ13595 282 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMCR8-201ENST00000406438 SSPNQ14714 243 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 PARD6AQ9NPB6 346 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 PLSCR3Q9NRY6 295 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 MED12Q93074 2177 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 PMCHP20382 165 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 DCTDP32321 178 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 GP2P55259 537 aaKnown RBP10.8□□□□□ -0.68
SMCR8-201ENST00000406438 PPP2CBP62714 309 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 PPP2CAP67775 309 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 EIF3IQ13347 325 aaKnown RBP10.8□□□□□ -0.68
SMCR8-201ENST00000406438 RTP5Q14D33 572 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 TMEM183BQ1AE95 376 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 NHLRC1Q6VVB1 395 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 ARRDC1Q8N5I2 433 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 OR6S1Q8NH40 331 aa10.8□□□□□ -0.68
SMCR8-201ENST00000406438 GPX5O75715 221 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 DHRS3O75911 302 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 PSMB2P49721 201 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 WDR89Q96FK6 387 aaPredicted RBP10.79□□□□□ -0.68
SMCR8-201ENST00000406438 LRRC61Q9BV99 259 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 TNFRSF19Q9NS68 423 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 GYPAP02724 150 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 PAQR6Q6TCH4 344 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 EXTL1Q92935 676 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 RHOFQ9HBH0 211 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 UQCC1Q9NVA1 299 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 ING1Q9UK53 422 aaPredicted RBP10.79□□□□□ -0.68
SMCR8-201ENST00000406438 FOXF1Q12946 379 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 TGIF2LXQ8IUE1 241 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 PRSS3P2Q8NHM4 247 aa10.79□□□□□ -0.68
SMCR8-201ENST00000406438 OTOSQ8NHW6 89 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms