RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 HSD17B12Q53GQ0 312 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 OR52N4Q8NGI2 321 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 ZNF671Q8TAW3 534 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 REG4Q9BYZ8 158 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 POLDIP2Q9Y2S7 368 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 PPIAL4EA0A075B759 164 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 SRRM5B3KS81 715 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 RNF223E7ERA6 249 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 PPIAL4DF5H284 164 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 ZNF205O95201 554 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 FSTL3O95633 263 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 PPIAL4FP0DN26 164 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 GALP22466 123 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 BOLLQ8N9W6 283 aaKnown RBP24.63■■□□□ 1.53
USP42-202ENST00000404008 RFT1Q96AA3 541 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 PPIAL4AQ9Y536 164 aa24.63■■□□□ 1.53
USP42-202ENST00000404008 CR1P17927 2039 aa24.62■■□□□ 1.53
USP42-202ENST00000404008 TRDV1A0A1B0GX56 115 aa24.62■■□□□ 1.53
USP42-202ENST00000404008 WNT9BO14905 357 aa24.62■■□□□ 1.53
USP42-202ENST00000404008 AKR7A2O43488 359 aa24.62■■□□□ 1.53
USP42-202ENST00000404008 PLATP00750 562 aa24.62■■□□□ 1.53
USP42-202ENST00000404008 CD80P33681 288 aa24.62■■□□□ 1.53
USP42-202ENST00000404008 DDI2Q5TDH0 399 aa24.62■■□□□ 1.53
USP42-202ENST00000404008 CPNE2Q96FN4 548 aaPredicted RBP24.62■■□□□ 1.53
USP42-202ENST00000404008 STUB1Q9UNE7 303 aa24.62■■□□□ 1.53
USP42-202ENST00000404008 CREBBPQ92793 2442 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 IGHV4-61A0A0C4DH41 118 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP24.61■■□□□ 1.53
USP42-202ENST00000404008 ARL6IP5O75915 188 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 PGA5P0DJD9 388 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 CD36P16671 472 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 PDZK1IP1Q13113 114 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 SLC25A26Q70HW3 274 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 LRRC28Q86X40 367 aaPredicted RBP24.61■■□□□ 1.53
USP42-202ENST00000404008 POC1AQ8NBT0 407 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 C19orf18Q8NEA5 215 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 TCF7L1Q9HCS4 588 aa24.61■■□□□ 1.53
USP42-202ENST00000404008 ISPDA4D126 451 aa24.6■■□□□ 1.53
USP42-202ENST00000404008 NOS1APO75052 506 aaPredicted RBP24.6■■□□□ 1.53
USP42-202ENST00000404008 MAS1P04201 325 aa24.6■■□□□ 1.53
USP42-202ENST00000404008 ACAA1P09110 424 aaPredicted RBP24.6■■□□□ 1.53
USP42-202ENST00000404008 SRMP19623 302 aa24.6■■□□□ 1.53
USP42-202ENST00000404008 USF1P22415 310 aaPredicted RBP24.6■■□□□ 1.53
USP42-202ENST00000404008 MDH2P40926 338 aaKnown RBP24.6■■□□□ 1.53
USP42-202ENST00000404008 POU3F4P49335 361 aa24.6■■□□□ 1.53
USP42-202ENST00000404008 SATL1Q86VE3 508 aa24.6■■□□□ 1.53
USP42-202ENST00000404008 OOEPA6NGQ2 149 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 C3orf80F5H4A9 247 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 CALRP27797 417 aaKnown RBP24.59■■□□□ 1.53
USP42-202ENST00000404008 ZP1P60852 638 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 TEX36Q5VZQ5 186 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 SFRP4Q6FHJ7 346 aaPredicted RBP24.59■■□□□ 1.53
USP42-202ENST00000404008 LRRTM1Q86UE6 522 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 OR5D18Q8NGL1 313 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 ZNF488Q96MN9 340 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 WDR13Q9H1Z4 485 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 NARFLQ9H6Q4 476 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 TMEM165Q9HC07 324 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 MTCH1Q9NZJ7 389 aa24.59■■□□□ 1.53
USP42-202ENST00000404008 H7C1Q1 480 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 LGALS8O00214 317 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 SPRY1O43609 319 aaPredicted RBP24.58■■□□□ 1.53
USP42-202ENST00000404008 ADRA2CP18825 462 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 ZNF93P35789 620 aaPredicted RBP24.58■■□□□ 1.53
USP42-202ENST00000404008 GMFBP60983 142 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 LOXL1Q08397 574 aaPredicted RBP24.58■■□□□ 1.53
USP42-202ENST00000404008 ZNF404Q494X3 552 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 TMEM155Q4W5P6 130 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 MKXQ8IYA7 352 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 MUC20Q8N307 709 aaPredicted RBP24.58■■□□□ 1.53
USP42-202ENST00000404008 CIARTQ8N365 385 aaPredicted RBP24.58■■□□□ 1.53
USP42-202ENST00000404008 NKAIN3Q8N8D7 197 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 SLAMF9Q96A28 289 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 YIPF6Q96EC8 236 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 GPER1Q99527 375 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 NRIP2Q9BQI9 281 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 OR51E2Q9H255 320 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 ZANQ9Y493 2812 aa24.58■■□□□ 1.53
USP42-202ENST00000404008 GLRA1P23415 457 aa24.57■■□□□ 1.52
USP42-202ENST00000404008 FGF9P31371 208 aaPredicted RBP24.57■■□□□ 1.52
USP42-202ENST00000404008 CDH26Q8IXH8 852 aa24.57■■□□□ 1.52
USP42-202ENST00000404008 DEFB108BQ8NET1 73 aa24.57■■□□□ 1.52
USP42-202ENST00000404008 CLDND2Q8NHS1 167 aa24.57■■□□□ 1.52
USP42-202ENST00000404008 SEH1LQ96EE3 360 aa24.57■■□□□ 1.52
USP42-202ENST00000404008 NKX3-1Q99801 234 aaPredicted RBP24.57■■□□□ 1.52
USP42-202ENST00000404008 SLITRK2Q9H156 845 aa24.57■■□□□ 1.52
USP42-202ENST00000404008 RASL12Q9NYN1 266 aa24.57■■□□□ 1.52
USP42-202ENST00000404008 IGHV3OR15-7A0A075B7D8 119 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 TRAV38-1A0A0B4J264 116 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 MEGF11A6BM72 1044 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 CYB5AP00167 134 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 GADD45AP24522 165 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 ERVK11-1P61568 191 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 C22orf42Q6IC83 251 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 LYPD6Q86Y78 171 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 FAM90A1Q86YD7 464 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 SAXO1Q8IYX7 474 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 SPICQ8N5J4 248 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 ZSCAN4Q8NAM6 433 aaPredicted RBP24.56■■□□□ 1.52
USP42-202ENST00000404008 MAPK1IP1LQ8NDC0 245 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms