RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 HRASLS5Q96KN8 279 aa10.95□□□□□ -0.66
SDF4-203ENST00000403997 ZNF488Q96MN9 340 aa10.95□□□□□ -0.66
SDF4-203ENST00000403997 ZNF747Q9BV97 191 aa10.95□□□□□ -0.66
SDF4-203ENST00000403997 UNKLQ9H9P5 680 aaKnown RBP10.95□□□□□ -0.66
SDF4-203ENST00000403997 ELL3Q9HB65 397 aaPredicted RBP10.95□□□□□ -0.66
SDF4-203ENST00000403997 GNG8Q9UK08 70 aa10.95□□□□□ -0.66
SDF4-203ENST00000403997 POLDIP2Q9Y2S7 368 aa10.95□□□□□ -0.66
SDF4-203ENST00000403997 FAM96BQ9Y3D0 163 aa10.95□□□□□ -0.66
SDF4-203ENST00000403997 TENM1Q9UKZ4 2725 aa10.95□□□□□ -0.66
SDF4-203ENST00000403997 A0A0U1RQK1 487 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 FAM230AA0A1W2PPH8 454 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 FAM181BA6NEQ2 426 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 SYT7O43581 403 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 ENTPD6O75354 484 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 NXPH2O95156 264 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 CCL1P22362 96 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 OMGP23515 440 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 EEF1B2P24534 225 aaKnown RBP10.94□□□□□ -0.66
SDF4-203ENST00000403997 DLX1P56177 255 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 ZNF85Q03923 595 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 BLMHQ13867 455 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 SMIM21Q3B7S5 101 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 TP53I3Q53FA7 332 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 FIP1L1Q6UN15 594 aaKnown RBP10.94□□□□□ -0.66
SDF4-203ENST00000403997 FAM220AQ7Z4H9 259 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 ANGPTL5Q86XS5 388 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 CBR4Q8N4T8 237 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 TMEM86BQ8N661 226 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 Q8N7P7 452 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 SGMS2Q8NHU3 365 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 TRMT10AQ8TBZ6 339 aaKnown RBP10.94□□□□□ -0.66
SDF4-203ENST00000403997 TBC1D15Q8TC07 691 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 SSMEM1Q8WWF3 244 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 SDSLQ96GA7 329 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 CHIAQ9BZP6 476 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 PLEKHA1Q9HB21 404 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 USE1Q9NZ43 259 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 ZNF222Q9UK12 451 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.94□□□□□ -0.663e-9■■■■□ 23.5
SDF4-203ENST00000403997 SLC7A11Q9UPY5 501 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 MAB21L2Q9Y586 359 aa10.94□□□□□ -0.66
SDF4-203ENST00000403997 A0A1W2PRD5 423 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 A0A1W2PRF3 423 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 A0A1W2PRM7 423 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 ANKRD61A6NGH8 418 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 POM121CA8CG34 1229 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 M0R1W7 72 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 NOS1APO75052 506 aaPredicted RBP10.93□□□□□ -0.66
SDF4-203ENST00000403997 PGA5P0DJD9 388 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 PRDX2P32119 198 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 ALDH3A2P51648 485 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 GUCA2AQ02747 115 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 KLRD1Q13241 179 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 METAP1DQ6UB28 335 aaPredicted RBP10.93□□□□□ -0.66
SDF4-203ENST00000403997 SHISA2Q6UWI4 295 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 C1orf122Q6ZSJ8 110 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 FAM185AQ8N0U4 392 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 BATF2Q8N1L9 274 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 CD177Q8N6Q3 437 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 NPRL2Q8WTW4 380 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 RNFT2Q96EX2 444 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 CAB39Q9Y376 341 aaPredicted RBP10.93□□□□□ -0.66
SDF4-203ENST00000403997 POMT1Q9Y6A1 747 aa10.93□□□□□ -0.66
SDF4-203ENST00000403997 DAPL1A0PJW8 107 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 H0YAE9 185 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 RNASEK-C17orf49H0YIS7 233 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 SLC1A7O00341 560 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 EBAG9O00559 213 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 NPFFO15130 113 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 SERPINA3P01011 423 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 MDKP21741 143 aaPredicted RBP10.92□□□□□ -0.66
SDF4-203ENST00000403997 SNRPGP62308 76 aaKnown RBP10.92□□□□□ -0.66
SDF4-203ENST00000403997 UBE2V2Q15819 145 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 OCLNQ16625 522 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 SLC25A30Q5SVS4 291 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 MEDAGQ5VYS4 303 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 KCTD20Q7Z5Y7 419 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 CALHM1Q8IU99 346 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 RDH10Q8IZV5 341 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 PRSS35Q8N3Z0 413 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 ZNF561Q8N587 486 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 CCDC54Q8NEL0 328 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 NRIP2Q9BQI9 281 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 DPAGT1Q9H3H5 408 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 METTL8Q9H825 291 aaKnown RBP10.92□□□□□ -0.66
SDF4-203ENST00000403997 OR14J1Q9UGF5 321 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 GMPPBQ9Y5P6 360 aa10.92□□□□□ -0.66
SDF4-203ENST00000403997 TRBV23-1A0A0A0MS06 115 aa10.91□□□□□ -0.66
SDF4-203ENST00000403997 SNTNA6NMZ2 147 aa10.91□□□□□ -0.66
SDF4-203ENST00000403997 GATBO75879 557 aaKnown RBP10.91□□□□□ -0.66
SDF4-203ENST00000403997 IGHV4-59P01825 116 aa10.91□□□□□ -0.66
SDF4-203ENST00000403997 FBP1P09467 338 aa10.91□□□□□ -0.66
SDF4-203ENST00000403997 UBCP0CG48 685 aaKnown RBP10.91□□□□□ -0.66
SDF4-203ENST00000403997 MPZP25189 248 aa10.91□□□□□ -0.66
SDF4-203ENST00000403997 KIR3DL2P43630 455 aa10.91□□□□□ -0.66
SDF4-203ENST00000403997 IER3P46695 156 aa10.91□□□□□ -0.66
SDF4-203ENST00000403997 CEBPDP49716 269 aaPredicted RBP10.91□□□□□ -0.66
SDF4-203ENST00000403997 FUT6P51993 359 aa10.91□□□□□ -0.66
SDF4-203ENST00000403997 ISL1P61371 349 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms