RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 KRASP01116 189 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 NGFP01138 241 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 RAC3P60763 192 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 PMP22Q01453 160 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 MRGPREQ86SM8 312 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 FAM58AQ8N1B3 248 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 ZDHHC22Q8N966 263 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 NPEPL1Q8NDH3 523 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 M1APQ8TC57 530 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 AQP7P3A6NL99 342 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 LSM11P83369 360 aaKnown RBP eCLIP16.16■□□□□ 0.183e-7■■□□□ 12.7
COL18A1-204ENST00000400337 RXFP4Q8TDU9 374 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 C2CD4CQ8TF44 421 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 TVP23CQ96ET8 276 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 NEURL2Q9BR09 285 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 SOX7Q9BT81 388 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 ZNF768Q9H5H4 540 aaKnown RBP16.16■□□□□ 0.18
COL18A1-204ENST00000400337 RFPL4AA6NLU0 287 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 PPP5D1E7EU14 171 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 RFPL4AL1F8VTS6 287 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 TMEM52Q8NDY8 209 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 FAM117AQ9C073 453 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 CDC14BO60729 498 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 HNF1AP20823 631 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 PRSS42Q7Z5A4 293 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 PTP4A1Q93096 173 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 ABHD1Q96SE0 405 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 TRIP12Q14669 1992 aaPredicted RBP16.16■□□□□ 0.18
COL18A1-204ENST00000400337 ACSM4P0C7M7 580 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 KHDC1LQ5JSQ8 128 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 ADGRG3Q86Y34 549 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 NMES1Q9C002 83 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
COL18A1-204ENST00000400337 CRYM-AS1A6NIL9 109 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 LIPT2A6NK58 231 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 SLC25A6P12236 298 aa16.16■□□□□ 0.18
COL18A1-204ENST00000400337 ESRP2Q9H6T0 727 aaKnown RBP16.16■□□□□ 0.18
COL18A1-204ENST00000400337 FOCADQ5VW36 1801 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 PPP1R1AQ13522 171 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 MUC20Q8N307 709 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-204ENST00000400337 RFESDQ8TAC1 157 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 ERRFI1Q9UJM3 462 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-204ENST00000400337 PATE3B3GLJ2 98 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 M0R1X1 148 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 MBP02144 154 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 IGHV4-34P06331 123 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 GP1BAP07359 652 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 DHRS2Q13268 280 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 KCNK15Q9H427 330 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 IGHV5-10-1A0A0J9YXX1 117 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 HPP00738 406 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 MICBQ29980 383 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 NECAP1Q8NC96 275 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 OR8B12Q8NGG6 310 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 ZNF331Q9NQX6 463 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-204ENST00000400337 CEACAM6P40199 344 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 UBE2G2P60604 165 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 DBX2Q6ZNG2 339 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 ADGRG7Q96K78 797 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 TAAR3PQ9P1P4 343 aa16.15■□□□□ 0.18
COL18A1-204ENST00000400337 SULT1A3P0DMM9 295 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 SULT1A4P0DMN0 295 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 CSN1S1P47710 185 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 SCAND1P57086 179 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 SKP2Q13309 424 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 OR13G1Q8NGZ3 307 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 TRMT61AQ96FX7 289 aaKnown RBP16.14■□□□□ 0.17
COL18A1-204ENST00000400337 H0Y8G0 127 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 NDUFB3O43676 98 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 TEX261Q6UWH6 196 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 C10orf90Q96M02 699 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 U3KQ87 197 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 M0R296 226 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 FOXS1O43638 330 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 PDGFBP01127 241 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-204ENST00000400337 TLE1Q04724 770 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 LRRC10Q5BKY1 277 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 KDF1Q8NAX2 398 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-204ENST00000400337 FRRS1LQ9P0K9 344 aa16.14■□□□□ 0.17
COL18A1-204ENST00000400337 TCRBV16S1A1N1A0A5B0 115 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 DEFB108AA8MXU0 73 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 TXNDC12O95881 172 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 ZNF705AQ6ZN79 300 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-204ENST00000400337 DTX4Q9Y2E6 619 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 ONECUT2O95948 504 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 C1QCP02747 245 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 FGF7P21781 194 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 GZMMP51124 257 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 PDZD11Q5EBL8 140 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 TMEM104Q8NE00 496 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 ZBTB37Q5TC79 503 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 GVQW1Q8N7I0 195 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 DUSP15Q9H1R2 295 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-204ENST00000400337 UCK1Q9HA47 277 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 ICAM5Q9UMF0 924 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 OGG1O15527 345 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 PDCD6O75340 191 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 CT45A10P0DMU9 189 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 GAB4Q2WGN9 574 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 C17orf78Q8N4C9 275 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms