RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 PNRC1Q12796 327 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 LCN10Q6JVE6 187 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 ACOT7LQ6ZUV0 252 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 GCSAMQ8N6F7 178 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 RNASE11Q8TAA1 199 aaKnown RBP5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 SSMEM1Q8WWF3 244 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 LOXL4Q96JB6 756 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR2A5Q96R48 311 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 SNX18Q96RF0 628 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 DLL4Q9NR61 685 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 STUB1Q9UNE7 303 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 PEX16Q9Y5Y5 336 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 LAMA5O15230 3695 aa5.4□□□□□ -1.54
TRAPPC13-202ENST00000399438 LMO7DNF2Z398 122 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 MPZL1O95297 269 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 IGKV1D-16P01601 117 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZNF35P13682 527 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 NDUFB7P17568 137 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 DUSP1P28562 367 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 PYCR1P32322 319 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 WNT4P56705 351 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 RAB31Q13636 194 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR1Q1Q15612 314 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 DCST2Q5T1A1 773 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZNF57Q68EA5 555 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 TMEM144Q7Z5S9 345 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR51D1Q8NGF3 324 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR10W1Q8NGF6 305 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR6K6Q8NGW6 343 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 NEIL3Q8TAT5 605 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 TMEM37Q8WXS4 190 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 RERGQ96A58 199 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 MRPL48Q96GC5 212 aaKnown RBP5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 TMEM56Q96MV1 263 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 SDF2Q99470 211 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 MICU1Q9BPX6 476 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 RHOFQ9HBH0 211 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 PLEKHB1Q9UF11 243 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 TMEM56-RWDD3S4R434 201 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 NBEAQ8NFP9 2946 aa5.4□□□□□ -1.55
TRAPPC13-202ENST00000399438 A0A0G2JMP0 313 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 A0A0X1KG70 313 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 NPIPA5E9PKD4 350 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 NPIPA3F8WFD2 350 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 PRYO14603 147 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 AQP8O94778 261 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 CSF3P09919 207 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 CT45A8P0DMV1 189 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 CT45A9P0DMV2 189 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 IL9P15248 144 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR1D4P47884 311 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 IDH3GP51553 393 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 GAS1P54826 345 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 BLOC1S1P78537 153 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 MLLT11Q13015 90 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 SLC25A35Q3KQZ1 300 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 SLC22A6Q4U2R8 563 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 CT45A2Q5DJT8 189 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 ATAD3CQ5T2N8 411 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 WDR25Q64LD2 544 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 BEST4Q8NFU0 473 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR4M2Q8NGB6 313 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR4D9Q8NGE8 314 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR56A1Q8NGH5 318 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR6N2Q8NGY6 317 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR5J2Q8NH18 312 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZNF524Q96C55 264 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 RNF183Q96D59 192 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 TIMD4Q96H15 378 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 PDCD1LG2Q9BQ51 273 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 GAREM1Q9H706 876 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 NPIPA1Q9UND3 350 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 COLEC10Q9Y6Z7 277 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 HYKKA2RU49 373 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 CENPXA8MT69 81 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZNF670-ZNF695F2Z2N8 137 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 HAX1O00165 279 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 GABRPO00591 440 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 ARPC1BO15143 372 aaKnown RBP5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 OIP5O43482 229 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 CHST10O43529 356 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 EFNA2O43921 213 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 GLSO94925 669 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 CTSEP14091 401 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZNF136P52737 540 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 SNRPGP62308 76 aaKnown RBP5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZXDAP98168 799 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 CDK5Q00535 292 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 PAX2Q02962 417 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 ST3GAL3Q11203 375 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 DEFB133Q30KQ1 61 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 PGGHGQ32M88 737 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 TMEM176BQ3YBM2 270 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 TRIQKQ629K1 86 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 ZNF620Q6ZNG0 422 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 LINC00471Q8N535 108 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 ADAD2Q8NCV1 583 aaKnown RBP5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 LFNGQ8NES3 379 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR10V1Q8NGI7 309 aa5.39□□□□□ -1.55
TRAPPC13-202ENST00000399438 OR52E2Q8NGJ4 325 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms