RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 A0A1W2PQ09 198 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 FAM181BA6NEQ2 426 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 METTL15A6NJ78 407 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 J3QT63 122 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 SULT1C4O75897 302 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 EEF1B2P24534 225 aaKnown RBP11.02□□□□□ -0.65
VCX3A-202ENST00000398729 HAAOP46952 286 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 BLMHQ13867 455 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 SMIM21Q3B7S5 101 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 ZFP1Q6P2D0 407 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 ACP7Q6ZNF0 438 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 Q6ZSR3 168 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 CCDC121Q6ZUS5 278 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 POC1AQ8NBT0 407 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 ZNRF1Q8ND25 227 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 TMEM185AQ8NFB2 350 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 NPRL2Q8WTW4 380 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 TRUB1Q8WWH5 349 aaKnown RBP11.02□□□□□ -0.65
VCX3A-202ENST00000398729 EME1Q96AY2 570 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 ADI1Q9BV57 179 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 CHIAQ9BZP6 476 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 PLEKHA1Q9HB21 404 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 ZNF222Q9UK12 451 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 CAB39Q9Y376 341 aaPredicted RBP11.02□□□□□ -0.65
VCX3A-202ENST00000398729 MAB21L2Q9Y586 359 aa11.02□□□□□ -0.65
VCX3A-202ENST00000398729 TRBV23-1A0A0A0MS06 115 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 PQLC2LA1A4F0 135 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 ANKRD61A6NGH8 418 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 A6NIN4 97 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 RFPL4AA6NLU0 287 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 RFPL4AL1F8VTS6 287 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 M0R1W7 72 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 SYT7O43581 403 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 SYNGR1O43759 233 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 NOS1APO75052 506 aaPredicted RBP11.01□□□□□ -0.65
VCX3A-202ENST00000398729 ALPLP05186 524 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 PGA5P0DJD9 388 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 MDKP21741 143 aaPredicted RBP11.01□□□□□ -0.65
VCX3A-202ENST00000398729 CCL1P22362 96 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 OMGP23515 440 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 KPNB1Q14974 876 aaKnown RBP11.01□□□□□ -0.65
VCX3A-202ENST00000398729 ODF4Q2M2E3 257 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 C1orf122Q6ZSJ8 110 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 FAM220AQ7Z4H9 259 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 CATSPERDQ86XM0 798 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 LDLRAD3Q86YD5 345 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 Q8N7P7 452 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 CCDC54Q8NEL0 328 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 OR4F5Q8NH21 305 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 RORBQ92753 470 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 TAF15Q92804 592 aaKnown RBP eCLIP11.01□□□□□ -0.65
VCX3A-202ENST00000398729 SDSLQ96GA7 329 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 METTL8Q9H825 291 aaKnown RBP11.01□□□□□ -0.65
VCX3A-202ENST00000398729 ELL3Q9HB65 397 aaPredicted RBP11.01□□□□□ -0.65
VCX3A-202ENST00000398729 SLC7A11Q9UPY5 501 aa11.01□□□□□ -0.65
VCX3A-202ENST00000398729 A0A0G2JK05 382 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 A0A1B0GUS0 222 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 RNASEK-C17orf49H0YIS7 233 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 SLC1A7O00341 560 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 EI24O14681 340 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 NXPH2O95156 264 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 IGHV4-59P01825 116 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 FBP1P09467 338 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 CAPZA1P52907 286 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 RPL15P61313 204 aaKnown RBP11□□□□□ -0.65
VCX3A-202ENST00000398729 MIDNQ504T8 468 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 NCR3LG1Q68D85 454 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 C10orf67Q8IYJ2 551 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 ZNF561Q8N587 486 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 DYRK2Q92630 601 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 HRASLS5Q96KN8 279 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 ZNF488Q96MN9 340 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 DPAGT1Q9H3H5 408 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 USE1Q9NZ43 259 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 GNG8Q9UK08 70 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 MMP24Q9Y5R2 645 aa11□□□□□ -0.65
VCX3A-202ENST00000398729 FAM230AA0A1W2PPH8 454 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 H3BNX3 289 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 H3BSH0 61 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 NPFFO15130 113 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 GATBO75879 557 aaKnown RBP10.99□□□□□ -0.65
VCX3A-202ENST00000398729 MPZP25189 248 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 PRDX2P32119 198 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 IER3P46695 156 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 ALDH3A2P51648 485 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 RAG2P55895 527 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 DLX1P56177 255 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 ACTC1P68032 377 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 ACTA1P68133 377 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 ZNF85Q03923 595 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 PRB3Q04118 309 aaPredicted RBP10.99□□□□□ -0.65
VCX3A-202ENST00000398729 KLRD1Q13241 179 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 MEDAGQ5VYS4 303 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 FAM185AQ8N0U4 392 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 CD177Q8N6Q3 437 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 OR5D13Q8NGL4 314 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 TRMT10AQ8TBZ6 339 aaKnown RBP10.99□□□□□ -0.65
VCX3A-202ENST00000398729 TNFRSF14Q92956 283 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 UBE2FQ969M7 185 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms