RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 MRPL13Q9BYD1 178 aaKnown RBP7.21□□□□□ -1.25
PTPRD-204ENST00000397606 WNT5BQ9H1J7 359 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 ZNF629Q9UEG4 869 aaPredicted RBP7.21□□□□□ -1.25
PTPRD-204ENST00000397606 LSM2Q9Y333 95 aaKnown RBP7.21□□□□□ -1.25
PTPRD-204ENST00000397606 TRGV10A0A0A0MS01 117 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 EFNA2O43921 213 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 ISG15P05161 165 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 DNASE1P24855 282 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 DGCR2P98153 550 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 GGNQ86UU5 652 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 CDH26Q8IXH8 852 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 OR10AD1Q8NGE0 317 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 OR5V1Q9UGF6 321 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 IGKV3D-15A0A087WSY6 115 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 ZNF716A6NP11 495 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 PRSS44E7EML9 344 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 PPIHO43447 177 aaKnown RBP7.21□□□□□ -1.26
PTPRD-204ENST00000397606 ADRB1P08588 477 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 DUSP1P28562 367 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 DLX5P56178 289 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 ZMYND11Q15326 602 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 AGAP6Q5VW22 663 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 RPUSD3Q6P087 351 aaKnown RBP7.21□□□□□ -1.26
PTPRD-204ENST00000397606 IGFL3Q6UXB1 125 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 IQCF2Q8IXL9 164 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 OR8H1Q8NGG4 311 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 OR5H6Q8NGV6 325 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 OR1S1Q8NH92 325 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 SGK3Q96BR1 496 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 NPAS1Q99742 590 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 UBTD1Q9HAC8 227 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 SCN8AQ9UQD0 1980 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 TRAV38-1A0A0B4J264 116 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 TMEM272A0A1B0GTI8 110 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 C10orf142B7Z368 130 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 PDCD6O75340 191 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 PRH1P02810 166 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 TCRBP04435 133 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 COX6B1P14854 86 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 MOB1BQ7L9L4 216 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 TMEM123Q8N131 208 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 OR51A4Q8NGJ6 313 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 SMIM4Q8WVI0 70 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 DENND4AQ7Z401 1863 aa7.21□□□□□ -1.26
PTPRD-204ENST00000397606 MUC22E2RYF6 1773 aaPredicted RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 DHRS7CA6NNS2 312 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 SCGB2A1O75556 95 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 ZNF92Q03936 586 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 DYRK1AQ13627 763 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 GRK1Q15835 563 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 NHLRC1Q6VVB1 395 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 TMEM171Q8WVE6 324 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 ADAT3Q96EY9 351 aaPredicted RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 C11orf54Q9H0W9 315 aaPredicted RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 AUNIPQ9H7T9 357 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 RNF115Q9Y4L5 304 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 DNAJC13O75165 2243 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 FAM221AA4D161 298 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 GOSR2O14653 212 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 CDIPTO14735 213 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 MPPED1O15442 326 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 IGHG3P01860 377 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 MDH2P40926 338 aaKnown RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 FDX2Q6P4F2 183 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 TMEM91Q6ZNR0 172 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 LYSMD2Q8IV50 215 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 OR5D13Q8NGL4 314 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 EDARADDQ8WWZ3 215 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 NARS2Q96I59 477 aaKnown RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 WDFY2Q96P53 400 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 RBM38Q9H0Z9 239 aaKnown RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 SIRT4Q9Y6E7 314 aaPredicted RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 BORCS7-ASMTA0A0B4J1R7 106 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 MEIOCA2RUB1 952 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 HIST1H1DP16402 221 aaKnown RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 TIMP3P35625 211 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 MMP15P51511 669 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 ENDOGQ14249 297 aaKnown RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 TATDN3Q17R31 274 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 ADAM5Q6NVV9 412 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 OR51S1Q8NGJ8 323 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 MSL2Q9HCI7 577 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 RNF7Q9UBF6 113 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 TRAV8-7A0A075B6U6 113 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 TRIM64BA6NI03 449 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 AKR7A2O43488 359 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 TUSC2O75896 110 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 OR5H8P0DN80 308 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 FSTP19883 344 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 EPHA1P21709 976 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 NPY4RP50391 375 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 LUMP51884 338 aaPredicted RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 ST3GAL2Q16842 350 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 CCDC190Q86UF4 302 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 ZNF709Q8N972 641 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 FAM206AQ9NX38 181 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 SLC23A1Q9UHI7 598 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 PURGQ9UJV8 347 aaKnown RBP7.2□□□□□ -1.26
PTPRD-204ENST00000397606 NUP50Q9UKX7 468 aa7.2□□□□□ -1.26
PTPRD-204ENST00000397606 F5H5P2 479 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms