RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 RARRES2Q99969 163 aa21.09■□□□□ 0.97
CSNK1E-203ENST00000396832 SH3BGRL3Q9H299 93 aa21.09■□□□□ 0.97
CSNK1E-203ENST00000396832 PLEKHA2Q9HB19 425 aa21.09■□□□□ 0.97
CSNK1E-203ENST00000396832 IGKV3D-11A0A0A0MRZ8 115 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 BORCS7-ASMTA0A0B4J1R7 106 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 FOXF1Q12946 379 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 SUMF2Q8NBJ7 301 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 JSRP1Q96MG2 331 aaPredicted RBP21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 GPR84Q9NQS5 396 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 RER1O15258 196 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 GIMD1P0DJR0 217 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 GGNBP1Q5YKI7 109 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 DNM1P34Q6PK57 102 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 TMEM156Q8N614 296 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 ZNF610Q8N9Z0 462 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 MRPL24Q96A35 216 aaKnown RBP21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 VN1R1Q9GZP7 353 aa21.08■□□□□ 0.97
CSNK1E-203ENST00000396832 DMDP11532 3685 aa21.08■□□□□ 0.96
CSNK1E-203ENST00000396832 IFNA21P01568 189 aa21.08■□□□□ 0.96
CSNK1E-203ENST00000396832 PPP1CCP36873 323 aaKnown RBP21.08■□□□□ 0.96
CSNK1E-203ENST00000396832 MFSD8Q8NHS3 518 aa21.08■□□□□ 0.96
CSNK1E-203ENST00000396832 GINS3Q9BRX5 216 aa21.08■□□□□ 0.96
CSNK1E-203ENST00000396832 NKX2-4Q9H2Z4 354 aa21.08■□□□□ 0.96
CSNK1E-203ENST00000396832 ELL3Q9HB65 397 aaPredicted RBP21.08■□□□□ 0.96
CSNK1E-203ENST00000396832 ZNF84P51523 738 aa21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 PDZD11Q5EBL8 140 aa21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 OR1L3Q8NH93 324 aa21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 GALNT14Q96FL9 552 aa21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 LIN37Q96GY3 246 aaPredicted RBP21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 ZNF701Q9NV72 531 aaPredicted RBP21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 GLI4P10075 376 aa21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 TAS2R46P59540 309 aa21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 ZNF343Q6P1L6 599 aa21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 H1FNTQ75WM6 255 aaPredicted RBP21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 DAZLQ92904 295 aaKnown RBP21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 NTNG2Q96CW9 530 aa21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 MTIF3Q9H2K0 278 aaKnown RBP21.07■□□□□ 0.96
CSNK1E-203ENST00000396832 SDK2Q58EX2 2172 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 TLCD2A6NGC4 264 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 SEC14L6B5MCN3 397 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 KLK2P20151 261 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 SERPINA2P20848 420 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 FBLP22087 321 aaKnown RBP21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 OR1D5P58170 312 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 GAMTQ14353 236 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 RSU1Q15404 277 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 GFI1BQ5VTD9 330 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 REC114Q7Z4M0 266 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 C1QL2Q7Z5L3 287 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 OR8B12Q8NGG6 310 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 A0A1W2PNR3 127 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 F10P00742 488 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 IGHMP01871 453 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 NDUFB7P17568 137 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 LMO1P25800 156 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 DAP3P51398 398 aaKnown RBP21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 BLKP51451 505 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 SUCLG1P53597 346 aaKnown RBP21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 ZNF121P58317 390 aaPredicted RBP21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 ACY1Q03154 408 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 UNQ6494/PRO21346Q6UXR6 183 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 FAM57BQ71RH2 274 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 STX12Q86Y82 276 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 HSD17B11Q8NBQ5 300 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 NAXEQ8NCW5 288 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 GPR61Q9BZJ8 451 aa21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 STRAPQ9Y3F4 350 aaKnown RBP21.06■□□□□ 0.96
CSNK1E-203ENST00000396832 CXCL1P09341 107 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 P2RY1P47900 373 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 PRSS12P56730 875 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 OR5AS1Q8N127 324 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 OR1N1Q8NGS0 311 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 LHFPL6Q9Y693 200 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 URGCP-MRPS24S4R325 110 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 SLC31A2O15432 143 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST1H2BKO60814 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST1H2BJP06899 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST1H2BOP23527 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST1H2BBP33778 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST1H2BDP58876 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST1H2BCP62807 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 SURF2Q15527 256 aaPredicted RBP21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST2H2BEQ16778 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 CHRFAM7AQ494W8 412 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 SGPP2Q8IWX5 399 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 FAM213BQ8TBF2 198 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 Q8WTZ3 238 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST1H2BHQ93079 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 CPNE4Q96A23 557 aaPredicted RBP21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST1H2BNQ99877 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 HIST1H2BMQ99879 126 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 ZDHHC8Q9ULC8 765 aa21.05■□□□□ 0.96
CSNK1E-203ENST00000396832 E5RGE8 158 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 E9PLN8 166 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 MBPP02686 304 aaPredicted RBP21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 FOLR1P15328 257 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 CCDC54Q8NEL0 328 aa21.04■□□□□ 0.96
CSNK1E-203ENST00000396832 OR51T1Q8NGJ9 327 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms