RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ISG15P05161 165 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 CXCL12P48061 93 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 PLAC9Q5JTB6 97 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 GUSBP11Q6P575 273 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 LINC00518Q8N0U6 118 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 SLC30A7Q8NEW0 376 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 OR14K1Q8NGZ2 314 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 GLYATL2Q8WU03 294 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 PIGQQ9BRB3 760 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 MMP24Q9Y5R2 645 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 RPS19BP1Q86WX3 136 aaKnown RBP14.22□□□□□ -0.13
PCDH1-203ENST00000394536 PAQR4Q8N4S7 273 aaPredicted RBP14.22□□□□□ -0.13
PCDH1-203ENST00000394536 NRIP2Q9BQI9 281 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 ZNF107Q9UII5 783 aaPredicted RBP14.22□□□□□ -0.13
PCDH1-203ENST00000394536 CHATP28329 748 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 CARD18P57730 90 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 RTL6Q6ICC9 239 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 PTX4Q96A99 478 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 SHDQ96IW2 340 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 RAB33BQ9H082 229 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 FIGNL2A6NMB9 653 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 ONECUT2O95948 504 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 NRASP01111 189 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 NDUFA6P56556 154 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 SLC25A26Q70HW3 274 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 CMTM1Q8IZ96 169 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 OR51H1Q8NH63 302 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 CLCC1Q96S66 551 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 CLDN16Q9Y5I7 305 aa14.21□□□□□ -0.13
PCDH1-203ENST00000394536 E5RGE8 158 aa14.21□□□□□ -0.14
PCDH1-203ENST00000394536 EIF1BO60739 113 aaKnown RBP14.21□□□□□ -0.14
PCDH1-203ENST00000394536 RFC3P40938 356 aa14.21□□□□□ -0.14
PCDH1-203ENST00000394536 ZNF133P52736 654 aaPredicted RBP14.21□□□□□ -0.14
PCDH1-203ENST00000394536 COL13A1Q5TAT6 717 aaPredicted RBP14.21□□□□□ -0.14
PCDH1-203ENST00000394536 MRPL21Q7Z2W9 205 aaKnown RBP14.21□□□□□ -0.14
PCDH1-203ENST00000394536 OR8U1Q8NH10 309 aa14.21□□□□□ -0.14
PCDH1-203ENST00000394536 CRLF2Q9HC73 371 aa14.21□□□□□ -0.14
PCDH1-203ENST00000394536 NSG2Q9Y328 171 aa14.21□□□□□ -0.14
PCDH1-203ENST00000394536 ZNF106Q9H2Y7 1883 aaKnown RBP14.21□□□□□ -0.14
PCDH1-203ENST00000394536 NUDT19A8MXV4 375 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 HSD17B6O14756 317 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 DHRS3O75911 302 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 LPAR6P43657 344 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 NKX2-1P43699 371 aaPredicted RBP14.2□□□□□ -0.14
PCDH1-203ENST00000394536 P2RY4P51582 365 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 TGIF1Q15583 401 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 ZNF774Q6NX45 483 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 LYZL2Q7Z4W2 148 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 ZNF385AQ96PM9 386 aaKnown RBP14.2□□□□□ -0.14
PCDH1-203ENST00000394536 A0A096LPE4 126 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 hCG_1809904A0A1W2PP81 198 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 A0A1W2PPZ6 126 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 A0A1W2PR64 198 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 A0A1W2PRV1 198 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 H0YIZ8 118 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 CXCL13O43927 109 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 SSSCA1O60232 199 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 HPNP05981 417 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 IGFBP3P17936 291 aaPredicted RBP14.2□□□□□ -0.14
PCDH1-203ENST00000394536 GDF1P27539 372 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 TAGLN2P37802 199 aaKnown RBP14.2□□□□□ -0.14
PCDH1-203ENST00000394536 SSR4P51571 173 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 SUMO3P55854 103 aaPredicted RBP14.2□□□□□ -0.14
PCDH1-203ENST00000394536 ETV3LQ6ZN32 361 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 SPIN2AQ99865 258 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 SPIN2BQ9BPZ2 258 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 BCO1Q9HAY6 547 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 FAM86C1Q9NVL1 165 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 A6NLC8 198 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 TMEM50BP56557 158 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 FABP9Q0Z7S8 132 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 D2HGDHQ8N465 521 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 SEC11CQ9BY50 192 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 ROS1P08922 2347 aa14.2□□□□□ -0.14
PCDH1-203ENST00000394536 MYO7BQ6PIF6 2116 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 GPR37O15354 613 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 CALCRP30988 508 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 NXPH1P58417 271 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 KIAA0141Q14154 515 aaPredicted RBP14.19□□□□□ -0.14
PCDH1-203ENST00000394536 TSC22D1Q15714 1073 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 PP6455Q8WZ26 134 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 RASL10BQ96S79 203 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 SLC26A1Q9H2B4 701 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 HDGFL3Q9Y3E1 203 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 A0A1B0GTI1 187 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 MSTNO14793 375 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 MEOX2P50222 304 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 DVL1P1P54792 670 aaPredicted RBP14.19□□□□□ -0.14
PCDH1-203ENST00000394536 CCL7P80098 99 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 PLGLB1Q02325 96 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 PLP2Q04941 152 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 ASPHD2Q6ICH7 369 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 CPNE4Q96A23 557 aaPredicted RBP14.19□□□□□ -0.14
PCDH1-203ENST00000394536 PLEKHA2Q9HB19 425 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 LRFN1Q9P244 771 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 OR2C1O95371 312 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 FHITP49789 147 aa14.19□□□□□ -0.14
PCDH1-203ENST00000394536 MECP2P51608 486 aaKnown RBP14.19□□□□□ -0.14
PCDH1-203ENST00000394536 SMAD4Q13485 552 aaKnown RBP14.19□□□□□ -0.14
PCDH1-203ENST00000394536 RABEPKQ7Z6M1 372 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms