RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 GAR1Q9NY12 217 aaKnown RBP16.74■□□□□ 0.27
CSPG5-202ENST00000383738 IFNA5P01569 189 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 LPCAT3Q6P1A2 487 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 PGLYRP3Q96LB9 341 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 ANKUB1A6NFN9 424 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 RCC1P18754 421 aaPredicted RBP16.74■□□□□ 0.27
CSPG5-202ENST00000383738 SKP2Q13309 424 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF141Q15928 474 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 PLPP5Q8NEB5 264 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 OR5M8Q8NGP6 311 aa16.74■□□□□ 0.27
CSPG5-202ENST00000383738 PIN1P1O15428 100 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 IL11P20809 199 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 AWAT1Q58HT5 328 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 MUCL1Q96DR8 90 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 NICN1Q9BSH3 213 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 MRM2Q9UI43 246 aaKnown RBP16.73■□□□□ 0.27
CSPG5-202ENST00000383738 SLC17A2O00624 439 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 GRPP07492 148 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 FGF2P09038 288 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 GLRA1P23415 457 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 SSPNQ14714 243 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 SLC25A30Q5SVS4 291 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF695Q8IW36 515 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 DNAJB11Q9UBS4 358 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 PIGLQ9Y2B2 252 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 C5orf49A4QMS7 147 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 ANKRD30BLA7E2S9 258 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 H3BMH7 237 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 TSPAN32Q96QS1 320 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF251Q9BRH9 671 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 TMPRSS13Q9BYE2 586 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 MRPS18AQ9NVS2 196 aaKnown RBP16.73■□□□□ 0.27
CSPG5-202ENST00000383738 ST6GALNAC2Q9UJ37 374 aa16.73■□□□□ 0.27
CSPG5-202ENST00000383738 MDKP21741 143 aaPredicted RBP16.72■□□□□ 0.27
CSPG5-202ENST00000383738 ACAA2P42765 397 aaKnown RBP16.72■□□□□ 0.27
CSPG5-202ENST00000383738 PDCD1Q15116 288 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF239Q16600 458 aaKnown RBP16.72■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF705AQ6ZN79 300 aaPredicted RBP16.72■□□□□ 0.27
CSPG5-202ENST00000383738 CCDC54Q8NEL0 328 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 NIPSNAP3BQ9BS92 247 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 LOC102725191A0A1B0GVB3 256 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 DHHO43323 396 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 MSR1P21757 451 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 GALP22466 123 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.72■□□□□ 0.27
CSPG5-202ENST00000383738 RPUSD3Q6P087 351 aaKnown RBP16.72■□□□□ 0.27
CSPG5-202ENST00000383738 SLC22A25Q6T423 547 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 ADAD2Q8NCV1 583 aaKnown RBP16.72■□□□□ 0.27
CSPG5-202ENST00000383738 OR2G3Q8NGZ4 309 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 MARVELD3Q96A59 401 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 DNASE2O00115 360 aaPredicted RBP16.72■□□□□ 0.27
CSPG5-202ENST00000383738 HPP00738 406 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 SERPINA7P05543 415 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 EIF2S3P41091 472 aaKnown RBP16.72■□□□□ 0.27
CSPG5-202ENST00000383738 OR2T2Q6IF00 324 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 OXGR1Q96P68 337 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 PIPOXQ9P0Z9 390 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 SHANK1Q9Y566 2161 aa16.72■□□□□ 0.27
CSPG5-202ENST00000383738 C9orf170A2RU37 121 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 FABP6P51161 128 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 RPL23AP62750 156 aaKnown RBP16.71■□□□□ 0.27
CSPG5-202ENST00000383738 PMP22Q01453 160 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 LIPHQ8WWY8 451 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 RAB22AQ9UL26 194 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 H3BP45 60 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 PHF1O43189 567 aaPredicted RBP16.71■□□□□ 0.27
CSPG5-202ENST00000383738 EFSO43281 561 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 FTH1P19P0C7X4 201 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 MAGEA5P43359 124 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 GUK1Q16774 197 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF766Q5HY98 468 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 OR10D3Q8NH80 312 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 GDF2Q9UK05 429 aaPredicted RBP16.71■□□□□ 0.27
CSPG5-202ENST00000383738 C7orf77A4D0Y5 90 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 MKRN2OSH3BPM6 223 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 M0R135 149 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 TOX3O15405 576 aaPredicted RBP16.71■□□□□ 0.27
CSPG5-202ENST00000383738 SLC35D3Q5M8T2 416 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 OR51F2Q8NH61 342 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 OR2AE1Q8NHA4 323 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 KCNE4Q8WWG9 221 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF799Q96GE5 643 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 ZPBPQ9BS86 351 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 HES7Q9BYE0 225 aa16.71■□□□□ 0.27
CSPG5-202ENST00000383738 ZNF814B7Z6K7 855 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 GPR37O15354 613 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 C1QL1O75973 258 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 SMIM10L1P0DMW3 83 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 MEOX1P50221 254 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 DSCR4P56555 118 aaPredicted RBP16.7■□□□□ 0.26
CSPG5-202ENST00000383738 PCBD1P61457 104 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 SLC22A24Q8N4F4 322 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 CLDN23Q96B33 292 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 SMIM10Q96HG1 83 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 SLCO5A1Q9H2Y9 848 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 HS3ST3B1Q9Y662 390 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 GSTZ1O43708 216 aaPredicted RBP16.7■□□□□ 0.26
CSPG5-202ENST00000383738 EPPINO95925 133 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 HLA-HP01893 362 aa16.7■□□□□ 0.26
CSPG5-202ENST00000383738 MUC1P15941 1255 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms