RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 OR6K3Q8NGY3 331 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 PRORYQ9H606 182 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 GPR132Q9UNW8 380 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 A0A0D9SG52 128 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 OR3A2P47893 321 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 RRADP55042 308 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 P2RX3P56373 397 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 PLXDC2Q6UX71 529 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 RFPL4BQ6ZWI9 263 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 OR2AE1Q8NHA4 323 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 MARCH1Q8TCQ1 289 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 Q96M66 194 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 RNF122Q9H9V4 155 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 ELL3Q9HB65 397 aaPredicted RBP18.72■□□□□ 0.59
TRIM54-202ENST00000380075 PKD1L2Q7Z442 2459 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 XRCC2O43543 280 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 SYNGR4O95473 234 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 TMEM225BP0DP42 221 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 CLDN18P56856 261 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 ZNF345Q14585 488 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 PEG10Q86TG7 708 aaKnown RBP18.72■□□□□ 0.59
TRIM54-202ENST00000380075 ZNF546Q86UE3 836 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 LHFPL1Q86WI0 220 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 SKA3Q8IX90 412 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 SCARB1Q8WTV0 552 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 FN3KRPQ9HA64 309 aa18.72■□□□□ 0.59
TRIM54-202ENST00000380075 ATMQ13315 3056 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 A0A0B4J2A0 478 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 MMP7P09237 267 aaPredicted RBP18.71■□□□□ 0.59
TRIM54-202ENST00000380075 RRASP10301 218 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 ZNF708P17019 499 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 AKR1C4P17516 323 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 VAMP1P23763 118 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 RBP2P50120 134 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 CCL11P51671 97 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 SNU13P55769 128 aaKnown RBP18.71■□□□□ 0.59
TRIM54-202ENST00000380075 TBR1Q16650 682 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 ASCL4Q6XD76 172 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 SLC51BQ86UW2 128 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 COMMD7Q86VX2 200 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 ADAD2Q8NCV1 583 aaKnown RBP18.71■□□□□ 0.59
TRIM54-202ENST00000380075 OR10K1Q8NGX5 313 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 EXTL1Q92935 676 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 TTTY12Q9BZ98 90 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 PRDM14Q9GZV8 571 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 SHPKQ9UHJ6 478 aa18.71■□□□□ 0.59
TRIM54-202ENST00000380075 MCTS1Q9ULC4 181 aaKnown RBP18.71■□□□□ 0.59
TRIM54-202ENST00000380075 hCG_38984A0A1B0GV85 526 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 RPL36A-HNRNPH2H7BZ11 118 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 ECI1P42126 302 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 SURF2Q15527 256 aaPredicted RBP18.7■□□□□ 0.58
TRIM54-202ENST00000380075 TSPO2Q5TGU0 170 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 C11orf87Q6NUJ2 197 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 CSNK2A3Q8NEV1 391 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 BORCS8Q96FH0 119 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 HSF4Q9ULV5 492 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 KLF13Q9Y2Y9 288 aaPredicted RBP18.7■□□□□ 0.58
TRIM54-202ENST00000380075 DBX1A6NMT0 343 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 OR2F2O95006 317 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 NRASP01111 189 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 CSTBP04080 98 aaKnown RBP18.7■□□□□ 0.58
TRIM54-202ENST00000380075 OR2F1Q13607 317 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 OR8B8Q15620 311 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 DMRTC1Q5HYR2 192 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 OR5AP2Q8NGF4 316 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 SPSB4Q96A44 273 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 ST6GALNAC5Q9BVH7 336 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 MED9Q9NWA0 146 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 EDARQ9UNE0 448 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 ITPR1Q14643 2758 aa18.7■□□□□ 0.58
TRIM54-202ENST00000380075 ZNF724A8MTY0 619 aa18.69■□□□□ 0.58
TRIM54-202ENST00000380075 PATE4P0C8F1 98 aa18.69■□□□□ 0.58
TRIM54-202ENST00000380075 MPGP29372 298 aa18.69■□□□□ 0.58
TRIM54-202ENST00000380075 RSU1Q15404 277 aa18.69■□□□□ 0.58
TRIM54-202ENST00000380075 C1QTNF5Q9BXJ0 243 aa18.69■□□□□ 0.58
TRIM54-202ENST00000380075 PPA2Q9H2U2 334 aa18.69■□□□□ 0.58
TRIM54-202ENST00000380075 PCDHB16Q9NRJ7 776 aa18.69■□□□□ 0.58
TRIM54-202ENST00000380075 PLEKHJ1Q9NW61 149 aa18.69■□□□□ 0.58
TRIM54-202ENST00000380075 AP2S1P53680 142 aaPredicted RBP18.68■□□□□ 0.58
TRIM54-202ENST00000380075 FAM3AP98173 230 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 CYCSP99999 105 aaKnown RBP18.68■□□□□ 0.58
TRIM54-202ENST00000380075 CASTOR1Q8WTX7 329 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 MRPS24Q96EL2 167 aaKnown RBP18.68■□□□□ 0.58
TRIM54-202ENST00000380075 C5orf66Q9H5L9 145 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 IL36GQ9NZH8 169 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 ZNF230Q9UIE0 474 aaPredicted RBP18.68■□□□□ 0.58
TRIM54-202ENST00000380075 TNFSF18Q9UNG2 199 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 SLC7A11Q9UPY5 501 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 OSGIN2Q9Y236 505 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 EPG5Q9HCE0 2579 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 FAM230AA0A1W2PPH8 454 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 SFT2D2O95562 160 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 SERPINA5P05154 406 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 FUT6P51993 359 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 PLGLB1Q02325 96 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 CHRFAM7AQ494W8 412 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 OVCH2Q7RTZ1 564 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 KCNRGQ8N5I3 272 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 TMEM251Q8N6I4 163 aa18.68■□□□□ 0.58
TRIM54-202ENST00000380075 PXT1Q8NFP0 134 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms