RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 STAC2Q6ZMT1 411 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 SULF2Q8IWU5 870 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 SLAMF6Q96DU3 332 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 SFRP2Q96HF1 295 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 CHRDL1Q9BU40 450 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 PARLQ9H300 379 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 KIAA1456Q9P272 454 aa10.52□□□□□ -0.72
NPHP4-202ENST00000378161 DOCK1Q14185 1865 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 TSPAN2O60636 221 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 WNT11O96014 354 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 MMP9P14780 707 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 RPS15AP62244 130 aaKnown RBP10.52□□□□□ -0.73
NPHP4-202ENST00000378161 FIGLAQ6QHK4 219 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 PLXDC2Q6UX71 529 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 ZSCAN4Q8NAM6 433 aaPredicted RBP10.52□□□□□ -0.73
NPHP4-202ENST00000378161 SLC2A12Q8TD20 617 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 DGAT2Q96PD7 388 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 POLR3KQ9Y2Y1 108 aaPredicted RBP10.52□□□□□ -0.73
NPHP4-202ENST00000378161 SBF2Q86WG5 1849 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 A0A087WUU8 490 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 A8MVM7 634 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 ITGBL1O95965 494 aaPredicted RBP10.52□□□□□ -0.73
NPHP4-202ENST00000378161 HMGA1P17096 107 aaKnown RBP10.52□□□□□ -0.73
NPHP4-202ENST00000378161 FUT3P21217 361 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 NUMA1Q14980 2115 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 LTC4SQ16873 150 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 FFAR4Q5NUL3 377 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 TMEM144Q7Z5S9 345 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 VASH2Q86V25 355 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 LRRC3BQ96PB8 259 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 AQP10Q96PS8 301 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 TMEM14AQ9Y6G1 99 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 DENND4AQ7Z401 1863 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 CNTRLQ7Z7A1 2325 aa10.52□□□□□ -0.73
NPHP4-202ENST00000378161 IGLON5A6NGN9 336 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 RBFOX2O43251 390 aaKnown RBP eCLIP10.51□□□□□ -0.73
NPHP4-202ENST00000378161 TESK1Q15569 626 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 ZNF740Q8NDX6 193 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 WFDC5Q8TCV5 224 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 TMEM239Q8WW34 195 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 HS3ST3B1Q9Y662 390 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 SERTM1A2A2V5 107 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 SLC22A20A6NK97 555 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 CORTO00230 105 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 CTXN2P0C2S0 81 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 IL12BP29460 328 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 ZNF154Q13106 437 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.51□□□□□ -0.73
NPHP4-202ENST00000378161 LMX1AQ8TE12 382 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 PTPMT1Q8WUK0 201 aaPredicted RBP10.51□□□□□ -0.73
NPHP4-202ENST00000378161 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
NPHP4-202ENST00000378161 LRRC37AA6NMS7 1700 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 TMEM272A0A1B0GTI8 110 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 IFITM10A6NMD0 228 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 F11P03951 625 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 NPPBP16860 134 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 THBS3P49746 956 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 CSRP3P50461 194 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 LCN15Q6UWW0 184 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 LINC01551Q86U37 167 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 ZNF683Q8IZ20 524 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 SYS1Q8N2H4 156 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 SPIN2AQ99865 258 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 SPIN2BQ9BPZ2 258 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 MS4A8Q9BY19 250 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 DUXBA0A1W2PPF3 345 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 GAGE12BA1L429 117 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 TMEM150CB9EJG8 249 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 SLC33A1O00400 549 aaPredicted RBP10.51□□□□□ -0.73
NPHP4-202ENST00000378161 ST8SIA3O43173 380 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 HIST1H1TP22492 207 aaPredicted RBP10.51□□□□□ -0.73
NPHP4-202ENST00000378161 PSMB3P49720 205 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 DECR1Q16698 335 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 ZNF787Q6DD87 383 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 WBP2NLQ6ICG8 309 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 OR10P1Q8NGE3 313 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 OR4D5Q8NGN0 318 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 TMEM106BQ9NUM4 274 aa10.51□□□□□ -0.73
NPHP4-202ENST00000378161 FBLL1A6NHQ2 334 aaKnown RBP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 MSTNO14793 375 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 HSPB1P04792 205 aaKnown RBP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 HNRNPA1P09651 372 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 ZBTB25P24278 435 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 C2orf27AQ580R0 203 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 WDR25Q64LD2 544 aaPredicted RBP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 CD300LDQ6UXZ3 194 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 PRSS50Q9UI38 385 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 TIMM8BQ9Y5J9 83 aaPredicted RBP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 SLC17A3O00476 420 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 CTSVO60911 334 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 NDUFB2O95178 105 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 DUSP3P51452 185 aaPredicted RBP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 RAB38P57729 211 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 RPS21P63220 83 aaKnown RBP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 RBPJQ06330 500 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 CCSMST1Q4G0I0 132 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 CSNK1A1LQ8N752 337 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 CDRT4Q8N9R6 151 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 FGGYQ96C11 551 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms