RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 CTLA4P16410 223 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 LGALS4P56470 323 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 CLPPQ16740 277 aaPredicted RBP13.39□□□□□ -0.27
NPHP4-201ENST00000378156 TMEM123Q8N131 208 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 GPX8Q8TED1 209 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 MRPS18AQ9NVS2 196 aaKnown RBP13.39□□□□□ -0.27
NPHP4-201ENST00000378156 TCFL5Q9UL49 500 aa13.39□□□□□ -0.27
NPHP4-201ENST00000378156 A0A1W2PPH5 198 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 ZNF891A8MT65 544 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-201ENST00000378156 G3V3Q6 166 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 PHOX2AO14813 284 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 OGG1O15527 345 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 MEOX1P50221 254 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 FUT6P51993 359 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 RNPS1Q15287 305 aaKnown RBP13.38□□□□□ -0.27
NPHP4-201ENST00000378156 TIGITQ495A1 244 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 ZNF468Q5VIY5 522 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-201ENST00000378156 LSMEM1Q8N8F7 131 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 SMIM7Q9BQ49 75 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 FAM96BQ9Y3D0 163 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 LANCL1O43813 399 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 AVPR2P30518 371 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 SUMO1P63165 101 aaKnown RBP13.38□□□□□ -0.27
NPHP4-201ENST00000378156 VAMP3Q15836 100 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 VASH2Q86V25 355 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 OR10D3Q8NH80 312 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 A0A1W2PQD3 144 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 FOXS1O43638 330 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 NXPH3O95157 252 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 MPZL1O95297 269 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 FCARP24071 287 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 ETFDHQ16134 617 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 H2BFWTQ7Z2G1 175 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 MCHR2Q969V1 340 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 CTAG2O75638 210 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 ZIC2O95409 532 aaPredicted RBP13.38□□□□□ -0.27
NPHP4-201ENST00000378156 ERGP11308 486 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 CXCL3P19876 107 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 LCN15Q6UWW0 184 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 GTF2H5Q6ZYL4 71 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 TMEM229BQ8NBD8 167 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 CMBLQ96DG6 245 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 V9GYS6 101 aa13.38□□□□□ -0.27
NPHP4-201ENST00000378156 LCTP09848 1927 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 IGHV5-10-1A0A0J9YXX1 117 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 OR10J4P0C629 311 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 ZNF787Q6DD87 383 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 C11orf87Q6NUJ2 197 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 OSR2Q8N2R0 312 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 CT55Q8WUE5 264 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 TIMD4Q96H15 378 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 KCNK15Q9H427 330 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 TMEM272A0A1B0GTI8 110 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 RNASEK-C17orf49H0YIS7 233 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 OR4F5Q8NH21 305 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 PTPMT1Q8WUK0 201 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-201ENST00000378156 OR4F4Q96R69 305 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 ALPK2Q86TB3 2170 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 CNOT1A5YKK6 2376 aaKnown RBP13.37□□□□□ -0.27
NPHP4-201ENST00000378156 TCRBV16S1A1N1A0A5B0 115 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 EPOPA6NHQ4 379 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 PAX6P26367 422 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 NCR3LG1Q68D85 454 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 NHLRC1Q6VVB1 395 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 MUC20Q8N307 709 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-201ENST00000378156 SPSB1Q96BD6 273 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 DTX4Q9Y2E6 619 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 DSPPQ9NZW4 1301 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 OR2M5A3KFT3 312 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 TOX4O94842 621 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 UBE2G1P62253 170 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 SSX7Q7RTT5 188 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 ATG4DQ86TL0 474 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-201ENST00000378156 ZNF321PQ8N8H1 164 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 M1APQ8TC57 530 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 GPR87Q9BY21 358 aa13.37□□□□□ -0.27
NPHP4-201ENST00000378156 RIMS4Q9H426 269 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-201ENST00000378156 PNPP00491 289 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 FABP1P07148 127 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 NQO2P16083 231 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 TAS2R45P59539 299 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 ACOT6Q3I5F7 207 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-201ENST00000378156 SPATA46Q5T0L3 261 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 B3GNTL1Q67FW5 361 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-201ENST00000378156 ZNF626Q68DY1 528 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 GFRALQ6UXV0 394 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 RXFP4Q8TDU9 374 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 MMP7P09237 267 aaPredicted RBP13.36□□□□□ -0.27
NPHP4-201ENST00000378156 COX5AP20674 150 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 MOGAT2Q3SYC2 334 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 TRAV20A0A0B4J274 112 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 GPR31O00270 319 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 CRYBA2P53672 197 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 DHODHQ02127 395 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 TMEM128Q5BJH2 165 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 ARRDC1Q8N5I2 433 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 OR5B3Q8NH48 314 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 PRSS27Q9BQR3 290 aa13.36□□□□□ -0.27
NPHP4-201ENST00000378156 PPP1R3EQ9H7J1 279 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms