RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 OR8B12Q8NGG6 310 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 OR51H1Q8NH63 302 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 C22orf15Q8WYQ4 148 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 CTDSP1Q9GZU7 261 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 PIPOXQ9P0Z9 390 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 A0A1W2PPC4 97 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 PRKNO60260 465 aaPredicted RBP7.79□□□□□ -1.16
PCDH9-202ENST00000377865 SELEP16581 610 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 MMP16P51512 607 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 EFNB1P98172 346 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 TGFBR3Q03167 851 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 ZP4Q12836 540 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 MYBPHQ13203 477 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 CBLN3Q6UW01 205 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 LIAT1Q6ZQX7 453 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 OR51M1Q9H341 326 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 RYDENQ9NUL5 291 aaKnown RBP7.79□□□□□ -1.16
PCDH9-202ENST00000377865 IGKV1D-16P01601 117 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 ACKR3P25106 362 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 PKIAP61925 76 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 H2BFWTQ7Z2G1 175 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 ZNF573Q86YE8 665 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 ZNF707Q96C28 371 aaPredicted RBP7.79□□□□□ -1.16
PCDH9-202ENST00000377865 RSRP1Q9BUV0 290 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 LRRC61Q9BV99 259 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 LAMP3Q9UQV4 416 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 KCNMB2Q9Y691 235 aa7.79□□□□□ -1.16
PCDH9-202ENST00000377865 CT45A8P0DMV1 189 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 CT45A9P0DMV2 189 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 IRF2P14316 349 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 ARR3P36575 388 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 GAS1P54826 345 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 TPPP2P59282 170 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 EIF3IQ13347 325 aaKnown RBP7.78□□□□□ -1.16
PCDH9-202ENST00000377865 CT45A2Q5DJT8 189 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 TMEM240Q5SV17 173 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 ZDHHC23Q8IYP9 409 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 OR10P1Q8NGE3 313 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 OR6X1Q8NH79 312 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 MCHR2Q969V1 340 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 GCM1Q9NP62 436 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 RCC2Q9P258 522 aaKnown RBP7.78□□□□□ -1.16
PCDH9-202ENST00000377865 ANXA10Q9UJ72 324 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 AUP1Q9Y679 476 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 V9GYS6 101 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 E9PQ18 207 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 SPRY1O43609 319 aaPredicted RBP7.78□□□□□ -1.16
PCDH9-202ENST00000377865 NPBWR1P48145 328 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 ZNF528Q3MIS6 628 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 C1orf53Q5VUE5 145 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 NSUN5P2Q63ZY6 315 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 NECAP1Q8NC96 275 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 TAAR6Q96RI8 345 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 ATP5SQ99766 215 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 HINT2Q9BX68 163 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 MYLKQ15746 1914 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 SOCS1O15524 211 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 MPZL1O95297 269 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 LY86O95711 162 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 CCKARP32238 428 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 C4orf17Q53FE4 359 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 OR1F12Q8NHA8 337 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 NUBPLQ8TB37 319 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 RLN3Q8WXF3 142 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 MAGT1Q9H0U3 335 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 UCK1Q9HA47 277 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 DUXBA0A1W2PPF3 345 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 PITX3O75364 302 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 MOSPD3O75425 235 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 DEDDO75618 318 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 THY1P04216 161 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 NGFRP08138 427 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 GLULP15104 373 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 GALR1P47211 349 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 MOB1BQ7L9L4 216 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 SLC26A10Q8NG04 563 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 OR5C1Q8NGR4 320 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 ADAMTS17Q8TE56 1095 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 MRPL38Q96DV4 380 aaKnown RBP7.78□□□□□ -1.16
PCDH9-202ENST00000377865 POLDIP2Q9Y2S7 368 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 SCN10AQ9Y5Y9 1956 aa7.78□□□□□ -1.16
PCDH9-202ENST00000377865 CDRT15L2A8MXV6 281 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 PHOX2AO14813 284 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 ADAM20O43506 726 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 SMIM10L1P0DMW3 83 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 GFERP55789 205 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 PPP1CBP62140 327 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 TCTN1Q2MV58 587 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 SPANXN5Q5MJ07 72 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 LYSMD4Q5XG99 296 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 EXTL1Q92935 676 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 RPUSD4Q96CM3 377 aaKnown RBP7.77□□□□□ -1.16
PCDH9-202ENST00000377865 SMIM10Q96HG1 83 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 SLX1AQ9BQ83 275 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 STARD10Q9Y365 291 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 MMP24Q9Y5R2 645 aa7.77□□□□□ -1.16
PCDH9-202ENST00000377865 C4orf51C9J302 202 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 SCGB2A1O75556 95 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 NXPH2O95156 264 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 ONECUT2O95948 504 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms