RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CLEC2AQ6UVW9 174 aa7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 OR51A4Q8NGJ6 313 aa7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 LRRC20Q8TCA0 184 aa7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 SCGB1C1Q8TD33 95 aa7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 CHPT1Q8WUD6 406 aa7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 FAHD2AQ96GK7 314 aa7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 WDYHV1Q96HA8 205 aa7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 AMELYQ99218 206 aa7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 PHB2Q99623 299 aa7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 MYOZ1Q9NP98 299 aaPredicted RBP7.4□□□□□ -1.22
CRNKL1-202ENST00000377340 SCN8AQ9UQD0 1980 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 MED19A0JLT2 244 aaPredicted RBP7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 OR5H1A6NKK0 313 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 CSF3P09919 207 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 OR8U9P0C7N5 309 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 TDGF1P13385 188 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 ZNF708P17019 499 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 ELK1P19419 428 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 MAB21L1Q13394 359 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 MOB3BQ86TA1 216 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 OR8U1Q8NH10 309 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 ZNF488Q96MN9 340 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 BCL7BQ9BQE9 202 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 PSD2Q9BQI7 771 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 HSPB11Q9Y547 144 aa7.4□□□□□ -1.23
CRNKL1-202ENST00000377340 AIPO00170 330 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 PHF1O43189 567 aaPredicted RBP7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 GABARAPO95166 117 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 HPNP05981 417 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 GLAP06280 429 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 RPS4Y1P22090 263 aaKnown RBP7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 OR3A4PP47883 348 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 ZNF85Q03923 595 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 ZNF385CQ66K41 422 aaPredicted RBP7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 ZNF826PQ6ZT77 177 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 Q6ZT83 130 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 GLCCI1Q86VQ1 547 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 CMTM4Q8IZR5 234 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 FRRS1LQ9P0K9 344 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 SEMA5BQ9P283 1151 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 KLHDC2Q9Y2U9 406 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 B8ZZF3 427 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 F5H0A9 414 aaPredicted RBP7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 TEX46H3BTG2 121 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 SMAD7O15105 426 aaKnown RBP7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 SERPINF1P36955 418 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 FOXF2Q12947 444 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 FAAP20Q6NZ36 180 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 ZNF554Q86TJ5 538 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 OR1K1Q8NGR3 316 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 KLHDC3Q9BQ90 382 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 UQCC2Q9BRT2 126 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 CXXC4Q9H2H0 198 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 SPRR3Q9UBC9 169 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 LRRC3CA6NJW4 275 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 TERTO14746 1132 aaKnown RBP7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 DEFA4P12838 97 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 IL7P13232 177 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 FUT3P21217 361 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 GPR12P47775 334 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 ZNF92Q03936 586 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 ZP4Q12836 540 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 MUC15Q8N387 334 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 LILRB2Q8N423 598 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 OR52I2Q8NH67 350 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 ZFAND1Q8TCF1 268 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 RNF133Q8WVZ7 376 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 C22orf15Q8WYQ4 148 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 SEC22AQ96IW7 307 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 KCNK17Q96T54 332 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 S1PR3Q99500 378 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 PCGF1Q9BSM1 259 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 FAAP24Q9BTP7 215 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 CLN8Q9UBY8 286 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 HIVEP2P31629 2446 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 HTTP42858 3142 aa7.39□□□□□ -1.23
CRNKL1-202ENST00000377340 NCBP2LA6PVI3 153 aaKnown RBP7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 FAM157AC9JC47 383 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 NFYAP23511 347 aaPredicted RBP7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 ZNF181Q2M3W8 571 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 C6orf201Q7Z4U5 140 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 RFLNBQ8N5W9 214 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 TPRX1Q8N7U7 411 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 OR56B4Q8NH76 319 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 MRGPRDQ8TDS7 321 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 PERPQ96FX8 193 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 PIGMQ9H3S5 423 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 RIMS4Q9H426 269 aaPredicted RBP7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 KCNK15Q9H427 330 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 MPC1Q9Y5U8 109 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 TRAV38-1A0A0B4J264 116 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 GOSR2O14653 212 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 THY1P04216 161 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 EPXP11678 715 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 ATF4P18848 351 aaPredicted RBP7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 WT1P19544 449 aaPredicted RBP7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 OMGP23515 440 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 LIMS1P48059 325 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 LHX2P50458 406 aa7.38□□□□□ -1.23
CRNKL1-202ENST00000377340 RPS16P62249 146 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms