RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CTRB1P17538 263 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 TBPP20226 339 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 SORDQ00796 357 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 OR7A5Q15622 319 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 C4orf46Q504U0 113 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 CTRB2Q6GPI1 263 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 FAM122CQ6P4D5 195 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 NHLRC1Q6VVB1 395 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 CXorf67Q86X51 503 aaPredicted RBP10.75□□□□□ -0.69
VRK3-202ENST00000377011 KDM8Q8N371 416 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 C12orf45Q8N5I9 185 aaPredicted RBP10.75□□□□□ -0.69
VRK3-202ENST00000377011 PLPP7Q8NBV4 271 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 DDIT4LQ96D03 193 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 PRRT1Q99946 306 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 UQCC2Q9BRT2 126 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 ARL6Q9H0F7 186 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 DNTTIP1Q9H147 329 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 SLC25A32Q9H2D1 315 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 MOB1AQ9H8S9 216 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 BCO1Q9HAY6 547 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 TMEM138Q9NPI0 162 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 PRELID1Q9Y255 219 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 EMC9Q9Y3B6 208 aa10.75□□□□□ -0.69
VRK3-202ENST00000377011 A0A0D9SG52 128 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 A0A1B0GTI1 187 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 LIPT2A6NK58 231 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 DEFB108AA8MXU0 73 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 ZNF736B4DX44 427 aaPredicted RBP10.74□□□□□ -0.69
VRK3-202ENST00000377011 MS4A18H0YCH9 400 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 ARPC5O15511 151 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 BPNT1O95861 308 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 OR4E1P0C645 316 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 ZNF735P0CB33 412 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 HLA-GP17693 338 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 LOXP28300 417 aaPredicted RBP10.74□□□□□ -0.69
VRK3-202ENST00000377011 MELKQ14680 651 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 MS4A18Q3C1V0 323 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 FAHD2BQ6P2I3 314 aaPredicted RBP10.74□□□□□ -0.69
VRK3-202ENST00000377011 RHOUQ7L0Q8 258 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 ZDHHC22Q8N966 263 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 ZIC4Q8N9L1 334 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 SLC25A43Q8WUT9 341 aaPredicted RBP10.74□□□□□ -0.69
VRK3-202ENST00000377011 AQP3Q92482 292 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 FAHD2AQ96GK7 314 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 POFUT1Q9H488 388 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 FOXD3Q9UJU5 478 aaPredicted RBP10.74□□□□□ -0.69
VRK3-202ENST00000377011 B3GALT5Q9Y2C3 310 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 PLEKHA6Q9Y2H5 1048 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 HDGFL3Q9Y3E1 203 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 RHBDD3Q9Y3P4 386 aa10.74□□□□□ -0.69
VRK3-202ENST00000377011 PRRC2AP48634 2157 aaKnown RBP10.73□□□□□ -0.69
VRK3-202ENST00000377011 FXYD6-FXYD2A0A087WZ82 144 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 TMEM269A0A1B0GVZ9 245 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 H2BFMP0C1H6 154 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 UBBP0CG47 229 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 BDKRB2P30411 391 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 RPS27AP62979 156 aaKnown RBP10.73□□□□□ -0.69
VRK3-202ENST00000377011 UBA52P62987 128 aaKnown RBP10.73□□□□□ -0.69
VRK3-202ENST00000377011 ZNF345Q14585 488 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 RNPS1Q15287 305 aaKnown RBP10.73□□□□□ -0.69
VRK3-202ENST00000377011 ETFDHQ16134 617 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 C11orf88Q6PI97 169 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 ZNF627Q7L945 461 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 DCXRQ7Z4W1 244 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 ZNF584Q8IVC4 421 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 BVESQ8NE79 360 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 OR5M8Q8NGP6 311 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 FAM222BQ8WU58 562 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 FAM46BQ96A09 425 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 ZNF385AQ96PM9 386 aaKnown RBP10.73□□□□□ -0.69
VRK3-202ENST00000377011 FXYD6Q9H0Q3 95 aa10.73□□□□□ -0.69
VRK3-202ENST00000377011 C16orf97H3BN30 126 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 AMY2AP04746 511 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 ERCC1P07992 297 aaPredicted RBP10.72□□□□□ -0.69
VRK3-202ENST00000377011 SLC25A4P12235 298 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 MGMTP16455 207 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 MPGP29372 298 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 DAZAP2Q15038 168 aaPredicted RBP10.72□□□□□ -0.69
VRK3-202ENST00000377011 FAM189A2Q15884 450 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 PXDC1Q5TGL8 231 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.72□□□□□ -0.69
VRK3-202ENST00000377011 SLC22A24Q8N4F4 322 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 JAGN1Q8N5M9 183 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 PCNPQ8WW12 178 aaKnown RBP10.72□□□□□ -0.69
VRK3-202ENST00000377011 LINC00052Q96N35 136 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 GLRX2Q9NS18 164 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 GDF2Q9UK05 429 aaPredicted RBP10.72□□□□□ -0.69
VRK3-202ENST00000377011 IGKV3D-15A0A087WSY6 115 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 LYZL6O75951 148 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 OR2F2O95006 317 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 IGHV1-2P23083 117 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 OR3A2P47893 321 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 CSNK2A1P68400 391 aaPredicted RBP10.72□□□□□ -0.69
VRK3-202ENST00000377011 OR2F1Q13607 317 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 C2orf68Q2NKX9 166 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 TUSC1Q2TAM9 212 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 ZNF260Q3ZCT1 412 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 ATPAF1Q5TC12 328 aaPredicted RBP10.72□□□□□ -0.69
VRK3-202ENST00000377011 DCAF12L2Q5VW00 463 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 LIN54Q6MZP7 749 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms