RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 SLC35D3Q5M8T2 416 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 C10orf128Q5T292 105 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM108Q6UXF1 575 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SLC16A12Q6ZSM3 486 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 OR4X2Q8NGF9 303 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM126AQ9H061 195 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SLC35B3Q9H1N7 401 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 NIT2Q9NQR4 276 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 ASH2LQ9UBL3 628 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 V9GY05 133 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 JCADQ9P266 1359 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 IGHV3OR16-10A0A075B7F0 116 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 GFRA3O60609 400 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 AVPR2P30518 371 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 INSM1Q01101 510 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 ZNF787Q6DD87 383 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM81Q6P7N7 255 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 MYPOPQ86VE0 399 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 IGDCC3Q8IVU1 814 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 OR11G2Q8NGC1 345 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 PTP4A1Q93096 173 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SLCO1C1Q9NYB5 712 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 RIMS3Q9UJD0 308 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 ZNF281Q9Y2X9 895 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SIRT4Q9Y6E7 314 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 DEPDC5O75140 1603 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 KIAA1210Q9ULL0 1709 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 A0A087WV62 115 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 ELOA3CA0A087WX78 387 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 PRSS51A0A1B0GVH4 220 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 MASP2O00187 686 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 WNT9BO14905 357 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 ABLIM3O94929 683 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SNRPNP63162 240 aaKnown RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 RNPS1Q15287 305 aaKnown RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 RBMY1FQ15415 496 aaKnown RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 NADSYN1Q6IA69 706 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 ALKAL2Q6UX46 152 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 CLEC14AQ86T13 490 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 NAXDQ8IW45 347 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM251Q8N6I4 163 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 OR13H1Q8NG92 308 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 GPR137Q96N19 417 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 LAMTOR3Q9UHA4 124 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 AJAP1Q9UKB5 411 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 HRH3Q9Y5N1 445 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 DISP1Q96F81 1524 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 PREX2Q70Z35 1606 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM82A0PJX8 343 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SMLR1H3BR10 107 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 AQP9O43315 295 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 CTSVO60911 334 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 CA2P00918 260 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 TNFRSF1BP20333 461 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 COL8A1P27658 744 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 CD81P60033 236 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 PLP1P60201 277 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 ZNF750Q32MQ0 723 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 C3orf36Q3SXR2 165 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 ATRNL1Q5VV63 1379 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SLX4Q8IY92 1834 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 OR51S1Q8NGJ8 323 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 RNF17Q9BXT8 1623 aaKnown RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SLC26A1Q9H2B4 701 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 GPR35Q9HC97 309 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 HECW2Q9P2P5 1572 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 GALPQ9UBC7 116 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 KLF13Q9Y2Y9 288 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 TNCP24821 2201 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 LILRA1O75019 489 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 PRB1P04280 392 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 PROZP22891 400 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 LMO2P25791 158 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 HRH1P35367 487 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SEC61GP60059 68 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SOWAHCQ53LP3 525 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 DTX2Q86UW9 622 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 CBARPQ8N350 705 aaPredicted RBP4.19□□□□□ -1.74
SCN1A-202ENST00000375405 KRTCAP2Q8N6L1 136 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 C11orf44Q8N8P7 122 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 MS4A4EQ96PG1 132 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 SEC22CQ9BRL7 303 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 CACNG2Q9Y698 323 aa4.19□□□□□ -1.74
SCN1A-202ENST00000375405 TMEM210A6NLX4 147 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 SMPD2O60906 423 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 GJB5O95377 273 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 CA6P23280 308 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 DUTP33316 252 aaKnown RBP4.18□□□□□ -1.74
SCN1A-202ENST00000375405 CD80P33681 288 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 YBX1P67809 324 aaKnown RBP4.18□□□□□ -1.74
SCN1A-202ENST00000375405 PNRC1Q12796 327 aaPredicted RBP4.18□□□□□ -1.74
SCN1A-202ENST00000375405 PRR4Q16378 134 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 CLPPQ16740 277 aaPredicted RBP4.18□□□□□ -1.74
SCN1A-202ENST00000375405 C4orf48Q5BLP8 95 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 SPANXN4Q5MJ08 99 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 NCBP2-AS2Q69YL0 99 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 WBP2NLQ6ICG8 309 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 SSX8Q7RTT4 187 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 BPIFA4PQ86YQ2 179 aa4.18□□□□□ -1.74
SCN1A-202ENST00000375405 LRRC52Q8N7C0 313 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms