RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 LINC00346Q8IVM7 164 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 ELMOD2Q8IZ81 293 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 KDM8Q8N371 416 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 GTPBP8Q8N3Z3 284 aaPredicted RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 UXS1Q8NBZ7 420 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR4K17Q8NGC6 315 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR11H4Q8NGC9 324 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR10S1Q8NGN2 331 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR2T35Q8NGX2 323 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR6X1Q8NH79 312 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 SLAMF6Q96DU3 332 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 PGAM5Q96HS1 289 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OXGR1Q96P68 337 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR2A7Q96R45 310 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 UQCC2Q9BRT2 126 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 GINS4Q9BRT9 223 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 DEFB126Q9BYW3 111 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 ALX4Q9H161 411 aaPredicted RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 C1orf198Q9H425 327 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 METTL17Q9H7H0 456 aaPredicted RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 PTGES2Q9H7Z7 377 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 APMAPQ9HDC9 416 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 PNRC2Q9NPJ4 139 aaKnown RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 HIF1ANQ9NWT6 349 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 MED29Q9NX70 200 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 SLC2A8Q9NY64 477 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 PIPOXQ9P0Z9 390 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 UPB1Q9UBR1 384 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 PCDHGA5Q9Y5G8 931 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 AUP1Q9Y679 476 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 CACNA1GO43497 2377 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 BDP1A6H8Y1 2624 aa4.15□□□□□ -1.74
USP48-202ENST00000374730 MYO15AQ9UKN7 3530 aa4.15□□□□□ -1.74
USP48-202ENST00000374730 FRYLO94915 3013 aa4.15□□□□□ -1.74
USP48-202ENST00000374730 IGHV1-45A0A0A0MS14 117 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 A0A1B0GTI1 187 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 PLSCR5A0PG75 271 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 HMSDA8MTL9 139 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 C9J4A7 227 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 H3BSH0 61 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 P2RY10O00398 339 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ADAM20O43506 726 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 SYT7O43581 403 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 RAD1O60671 282 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 SLC22A5O76082 557 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 PMS2P2O95744 297 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 IFNA7P01567 189 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 IGHEP01854 428 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ERCC1P07992 297 aaPredicted RBP4.15□□□□□ -1.75
USP48-202ENST00000374730 COX6A1P12074 109 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ZNF17P17021 662 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 DUSP3P51452 185 aaPredicted RBP4.15□□□□□ -1.75
USP48-202ENST00000374730 FAM3BP58499 235 aaPredicted RBP4.15□□□□□ -1.75
USP48-202ENST00000374730 SLC35A1P78382 337 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ZFP36L1Q07352 338 aaKnown RBP4.15□□□□□ -1.75
USP48-202ENST00000374730 MEF2DQ14814 521 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ADIPOQQ15848 244 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 HIST3H3Q16695 136 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 CLLU1Q5K131 121 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 GLYATL3Q5SZD4 288 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 C10orf128Q5T292 105 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ZNF324BQ6AW86 544 aaPredicted RBP4.15□□□□□ -1.75
USP48-202ENST00000374730 LCN10Q6JVE6 187 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 FAAP20Q6NZ36 180 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 STEAP1BQ6NZ63 245 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 TSSK4Q6SA08 328 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 OPN5Q6U736 354 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 TEX261Q6UWH6 196 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 CFAP77Q6ZQR2 320 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 Q7L0L9 218 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 OR2W3Q7Z3T1 314 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 FAM185AQ8N0U4 392 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 GABRG1Q8N1C3 465 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 FTMTQ8N4E7 242 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 SLC22A24Q8N4F4 322 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 JAGN1Q8N5M9 183 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 WDSUB1Q8N9V3 476 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 CCDC54Q8NEL0 328 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ZNF680Q8NEM1 530 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 OR2AK2Q8NG84 335 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 OR1M1Q8NGA1 313 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 OR51A2Q8NGJ7 313 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ANGPTL6Q8NI99 470 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 M1APQ8TC57 530 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 CCDC107Q8WV48 283 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 AQP3Q92482 292 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 PNPLA2Q96AD5 504 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 FAM122AQ96E09 287 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 SEH1LQ96EE3 360 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 URB1-AS1Q96HZ7 61 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 IMMP1LQ96LU5 166 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 SLX1AQ9BQ83 275 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 SLC25A21Q9BQT8 299 aaPredicted RBP4.15□□□□□ -1.75
USP48-202ENST00000374730 SEC22CQ9BRL7 303 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ANGPTL4Q9BY76 406 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 PBOV1Q9GZY1 135 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 ATG5Q9H1Y0 275 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 KCNK15Q9H427 330 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 BEX1Q9HBH7 125 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 SH2D2AQ9NP31 389 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms