RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SLC5A6Q9Y289 635 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 HEATR5AQ86XA9 2040 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 A0A1B0GU03 582 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 ZNF860A6NHJ4 632 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 GPR75O95800 540 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 OPN1MWP04001 364 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 GUSBP08236 651 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 OPN1MW2P0DN77 364 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 OPN1MW3P0DN78 364 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 NOVA1P51513 510 aaKnown RBP11.37□□□□□ -0.59
PRPF4-201ENST00000374198 TRA2AQ13595 282 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRPF4-201ENST00000374198 FAM185AQ8N0U4 392 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 TMEM52Q8NDY8 209 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 NT5CQ8TCD5 201 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 CTHRC1Q96CG8 243 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 CYYR1Q96J86 154 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 DIRC2Q96SL1 478 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 ST6GALNAC5Q9BVH7 336 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 ZNF700Q9H0M5 742 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 SRD5A3Q9H8P0 318 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 AK3Q9UIJ7 227 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 RFNGQ9Y644 331 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 A0A1W2PRU2 124 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 P2RY10O00398 339 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 LATO43561 262 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 SMIM10L1P0DMW3 83 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 PNMTP11086 282 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 GNALP38405 381 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 CDK3Q00526 305 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 TAF9Q16594 264 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 SP5Q6BEB4 398 aaPredicted RBP11.37□□□□□ -0.59
PRPF4-201ENST00000374198 ZNF880Q6PDB4 577 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 ATG4DQ86TL0 474 aaPredicted RBP11.37□□□□□ -0.59
PRPF4-201ENST00000374198 TMEFF1Q8IYR6 380 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 SMIM10Q96HG1 83 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 FAAP24Q9BTP7 215 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 KIF26BQ2KJY2 2108 aa11.37□□□□□ -0.59
PRPF4-201ENST00000374198 TTC28Q96AY4 2481 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 SNRNP200O75643 2136 aaKnown RBP11.36□□□□□ -0.59
PRPF4-201ENST00000374198 NSG1A0A0A6YYJ2 146 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 SERINC4A6NH21 518 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 DIRAS3O95661 229 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 PRNPP04156 253 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 PCCBP05166 539 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 PDLIM4P50479 330 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 POLR2HP52434 150 aaKnown RBP11.36□□□□□ -0.59
PRPF4-201ENST00000374198 TMEM50BP56557 158 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 TAS2R46P59540 309 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 RPS15AP62244 130 aaKnown RBP11.36□□□□□ -0.59
PRPF4-201ENST00000374198 CSNK2A1P68400 391 aaPredicted RBP11.36□□□□□ -0.59
PRPF4-201ENST00000374198 EGR4Q05215 589 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 CSNK2A3Q8NEV1 391 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 OR52N5Q8NH56 324 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 NEK7Q8TDX7 302 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 HAS2Q92819 552 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 TMEM18Q96B42 140 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 LPAR2Q9HBW0 351 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 GPR173Q9NS66 373 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 SLC16A7O60669 478 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 PNRC1Q12796 327 aaPredicted RBP11.36□□□□□ -0.59
PRPF4-201ENST00000374198 ARFRP1Q13795 201 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 AARDQ4LEZ3 155 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 MRPL41Q8IXM3 137 aaKnown RBP11.36□□□□□ -0.59
PRPF4-201ENST00000374198 CLDND2Q8NHS1 167 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 STT3BQ8TCJ2 826 aa11.36□□□□□ -0.59
PRPF4-201ENST00000374198 LMF2Q9BU23 707 aaKnown RBP11.36□□□□□ -0.59
PRPF4-201ENST00000374198 LOC101059948A0A1B0GTJ6 334 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 FAM230AA0A1W2PPH8 454 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 MPIG6BO95866 241 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 ATP6V0CP27449 155 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 CCKARP32238 428 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 ALDH3B1P43353 468 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 SNU13P55769 128 aaKnown RBP11.35□□□□□ -0.59
PRPF4-201ENST00000374198 PMS2P11Q13670 270 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 NFATC4Q14934 902 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 P2RY6Q15077 328 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 TMEM31Q5JXX7 168 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 LY6G5CQ5SRR4 150 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 C1orf189Q5VU69 101 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 WBP2NLQ6ICG8 309 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 LILRA6Q6PI73 481 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 ZNF705AQ6ZN79 300 aaPredicted RBP11.35□□□□□ -0.59
PRPF4-201ENST00000374198 OR5L2Q8NGL0 311 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 OR4C3Q8NH37 302 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 ACY3Q96HD9 319 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 PHF7Q9BWX1 381 aaPredicted RBP11.35□□□□□ -0.59
PRPF4-201ENST00000374198 CHST11Q9NPF2 352 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 LRIT1Q9P2V4 623 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 HSF4Q9ULV5 492 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 POLR3KQ9Y2Y1 108 aaPredicted RBP11.35□□□□□ -0.59
PRPF4-201ENST00000374198 XIRP2A4UGR9 3374 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 SCN2AQ99250 2005 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 SPTBN5Q9NRC6 3674 aaKnown RBP11.35□□□□□ -0.59
PRPF4-201ENST00000374198 CDC14CA4D256 554 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 FOXS1O43638 330 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 C8AP07357 584 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 ASCL1P50553 236 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 RPL23AP62750 156 aaKnown RBP11.35□□□□□ -0.59
PRPF4-201ENST00000374198 DGAT2L6Q6ZPD8 337 aa11.35□□□□□ -0.59
PRPF4-201ENST00000374198 SULF2Q8IWU5 870 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms