RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 RDH5Q92781 318 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 IL22RA2Q969J5 263 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 ANAPC16Q96DE5 110 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 COX14Q96I36 57 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 PACRGQ96M98 296 aaPredicted RBP12.71□□□□□ -0.38
LMX1B-202ENST00000373474 COMMD5Q9GZQ3 224 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 KIAA1456Q9P272 454 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 TRBV5-3A0A0A0MS03 114 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 ANKRD20A5PA0PJZ0 165 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 CTDSPLO15194 276 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 RRP8O43159 456 aaKnown RBP12.71□□□□□ -0.38
LMX1B-202ENST00000373474 SRFP11831 508 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 SLC6A1P30531 599 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 HAAOP46952 286 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 HLA-DRB3P79483 266 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 FUT7Q11130 342 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 LILRA6Q6PI73 481 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 LRP11Q86VZ4 500 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 C4orf45Q96LM5 186 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 A0A096LPE4 126 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 A0A1W2PPZ6 126 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 SEMA7AO75326 666 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 ZFPL1O95159 310 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 AVPR2P30518 371 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 CLDN15P56746 228 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 ZNF141Q15928 474 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 KLF13Q9Y2Y9 288 aaPredicted RBP12.7□□□□□ -0.38
LMX1B-202ENST00000373474 NUP205Q92621 2012 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 CTSVO60911 334 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 FAHP16930 419 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 ETFBKMTQ8IXQ9 262 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 MUC20Q8N307 709 aaPredicted RBP12.7□□□□□ -0.38
LMX1B-202ENST00000373474 ZADH2Q8N4Q0 377 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 STRCP1A6NGW2 1772 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 C5orf52A6NGY3 159 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 WDR1O75083 606 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 PGA3P0DJD8 388 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 FAM3AP98173 230 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 ABI3BPQ7Z7G0 1075 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 C17orf47Q8NEP4 570 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 UBE2L5PA0A1B0GUS4 154 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 CBR3O75828 277 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 BMP5P22003 454 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 PPIAP62937 165 aaKnown RBP12.7□□□□□ -0.38
LMX1B-202ENST00000373474 PRSS3P2Q8NHM4 247 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 ZG16BQ96DA0 208 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 OR2A5Q96R48 311 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 DEFB127Q9H1M4 99 aa12.7□□□□□ -0.38
LMX1B-202ENST00000373474 LSM2Q9Y333 95 aaKnown RBP12.7□□□□□ -0.38
LMX1B-202ENST00000373474 DEDDO75618 318 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 GPANK1O95872 356 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 B4GALT1P15291 398 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 MTURNQ8N3F0 131 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 OR52N4Q8NGI2 321 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 BCL2L2Q92843 193 aaPredicted RBP12.69□□□□□ -0.38
LMX1B-202ENST00000373474 SPACA9Q96E40 222 aaPredicted RBP12.69□□□□□ -0.38
LMX1B-202ENST00000373474 ST6GAL2Q96JF0 529 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 ZNF552Q9H707 407 aaPredicted RBP12.69□□□□□ -0.38
LMX1B-202ENST00000373474 MIOXQ9UGB7 285 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 SERGEFQ9UGK8 458 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 TMED3Q9Y3Q3 217 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 GABRG2P18507 467 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 PSMB2P49721 201 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 SMAD4Q13485 552 aaKnown RBP12.69□□□□□ -0.38
LMX1B-202ENST00000373474 SLC25A26Q70HW3 274 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 ZNF547Q8IVP9 402 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 MAGT1Q9H0U3 335 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 SFT2D2O95562 160 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 GLRA1P23415 457 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 RPS23P62266 143 aaKnown RBP12.69□□□□□ -0.38
LMX1B-202ENST00000373474 EIF4E3Q8N5X7 224 aaKnown RBP12.69□□□□□ -0.38
LMX1B-202ENST00000373474 LPAR3Q9UBY5 353 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 HELTA6NFD8 242 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 HRASP01112 189 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 KRASP01116 189 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 MVDP53602 400 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 IRF3Q14653 427 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 NPIPB8E9PQR5 432 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 CDC42EP2O14613 210 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 YIF1AO95070 293 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 GYPAP02724 150 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 GNG4P50150 75 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 DMKNQ6E0U4 476 aaPredicted RBP12.69□□□□□ -0.38
LMX1B-202ENST00000373474 OR2V1Q8NHB1 315 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 POM121Q96HA1 1249 aa12.69□□□□□ -0.38
LMX1B-202ENST00000373474 C9orf170A2RU37 121 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 HIST1H1DP16402 221 aaKnown RBP12.68□□□□□ -0.38
LMX1B-202ENST00000373474 CDKN2AP42771 156 aaKnown RBP12.68□□□□□ -0.38
LMX1B-202ENST00000373474 OR2B11Q5JQS5 317 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 SLC25A30Q5SVS4 291 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 ZNF383Q8NA42 475 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 EDARADDQ8WWZ3 215 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 TRAF4Q9BUZ4 470 aaPredicted RBP12.68□□□□□ -0.38
LMX1B-202ENST00000373474 EGLN1Q9GZT9 426 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 CHST6Q9GZX3 395 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 SIRT7Q9NRC8 400 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 NAT8Q9UHE5 227 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 FIGNL2A6NMB9 653 aa12.68□□□□□ -0.38
LMX1B-202ENST00000373474 FFAR1O14842 300 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms