RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SLC25A26Q70HW3 274 aa22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 DVL3Q92997 716 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 SEH1LQ96EE3 360 aa22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 RTL8AQ9BWD3 113 aa22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 ZMAT3Q9HA38 289 aaKnown RBP22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 FAM240BA0A1B0GVZ2 78 aa22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 CYB5AP00167 134 aa22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 RGS7BPQ6MZT1 257 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 OR8G5Q8NG78 346 aa22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 DEDD2Q8WXF8 326 aa22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 NEDD4LQ96PU5 975 aa22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 NBEAQ8NFP9 2946 aa22.5■■□□□ 1.19
ATPAF1-202ENST00000371937 PCNX1Q96RV3 2341 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 IGKV1-12A0A0C4DH73 117 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 ANKRD20A5PA0PJZ0 165 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 TMEM235A6NFC5 223 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 SOCS1O15524 211 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 IGKV1D-12P01611 117 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 GSTP1P09211 210 aaKnown RBP22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 FABP6P51161 128 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 ACTBP60709 375 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 ACTG1P63261 375 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 SNTB2Q13425 540 aaKnown RBP22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 TMEM108Q6UXF1 575 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 TMEM200AQ86VY9 491 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 MKXQ8IYA7 352 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 DUSP18Q8NEJ0 188 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 Q96M66 194 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 TMEM100Q9NV29 134 aa22.49■■□□□ 1.19
ATPAF1-202ENST00000371937 HEATR1Q9H583 2144 aaKnown RBP22.48■■□□□ 1.19
ATPAF1-202ENST00000371937 WIPF3A6NGB9 483 aa22.48■■□□□ 1.19
ATPAF1-202ENST00000371937 CD40P25942 277 aa22.48■■□□□ 1.19
ATPAF1-202ENST00000371937 GLRXP35754 106 aa22.48■■□□□ 1.19
ATPAF1-202ENST00000371937 GUCA2AQ02747 115 aa22.48■■□□□ 1.19
ATPAF1-202ENST00000371937 ARL6IP1Q15041 203 aa22.48■■□□□ 1.19
ATPAF1-202ENST00000371937 ALKBH6Q3KRA9 238 aa22.48■■□□□ 1.19
ATPAF1-202ENST00000371937 ADAT1Q9BUB4 502 aaKnown RBP22.48■■□□□ 1.19
ATPAF1-202ENST00000371937 TIMM8AO60220 97 aaPredicted RBP22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 CSF1P09603 554 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 HIST1H1DP16402 221 aaKnown RBP22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 GNB3P16520 340 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 PTAFRP25105 342 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 KIR2DL3P43628 341 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 OSR2Q8N2R0 312 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 SLC6A1P30531 599 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 TMEM50BP56557 158 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 RPS23P62266 143 aaKnown RBP22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 PCGF3Q3KNV8 242 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 FBXL19-AS1Q494R0 122 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 FJX1Q86VR8 437 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 POM121Q96HA1 1249 aa22.47■■□□□ 1.19
ATPAF1-202ENST00000371937 NAP1L6A6NFF2 107 aa22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 AKR7A2O43488 359 aa22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 BLVRBP30043 206 aaPredicted RBP22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 NKX6-1P78426 367 aaPredicted RBP22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 OR8G1Q15617 311 aa22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 PLET1Q6UQ28 207 aa22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 WFDC8Q8IUA0 241 aa22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 Q8NFD4 153 aa22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 PKIBQ9C010 78 aa22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 NGBQ9NPG2 151 aa22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 NKIRAS2Q9NYR9 191 aa22.46■■□□□ 1.19
ATPAF1-202ENST00000371937 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 FOXI3A8MTJ6 420 aaPredicted RBP22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 SFTPBP07988 381 aa22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 PNLIPRP3Q17RR3 467 aa22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 FAM76BQ5HYJ3 339 aa22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 TMEM255AQ5JRV8 349 aa22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 PLAC9Q5JTB6 97 aa22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 HAGHLQ6PII5 290 aaPredicted RBP22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 ARHGAP5-AS1Q96IT6 56 aa22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 OR51I2Q9H344 312 aa22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 NLKQ9UBE8 527 aa22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 FZR1Q9UM11 496 aa22.45■■□□□ 1.19
ATPAF1-202ENST00000371937 ZNF250P15622 560 aa22.45■■□□□ 1.18
ATPAF1-202ENST00000371937 ELP2Q6IA86 826 aa22.45■■□□□ 1.18
ATPAF1-202ENST00000371937 LILRB4Q8NHJ6 448 aa22.45■■□□□ 1.18
ATPAF1-202ENST00000371937 LRRC46Q96FV0 321 aa22.45■■□□□ 1.18
ATPAF1-202ENST00000371937 RADILQ96JH8 1075 aa22.45■■□□□ 1.18
ATPAF1-202ENST00000371937 ZNF107Q9UII5 783 aaPredicted RBP22.45■■□□□ 1.18
ATPAF1-202ENST00000371937 ELF5Q9UKW6 265 aaPredicted RBP22.45■■□□□ 1.18
ATPAF1-202ENST00000371937 ATP6V1G2-DDX39BF2Z307 99 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 TRAPPC2LH3BP13 241 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 THBDP07204 575 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 GABRR1P24046 479 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 FAUP35544 74 aaKnown RBP22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 GNG2P59768 71 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 ADORA2A-AS1P86434 159 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 IL24Q13007 206 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 FBXL14Q8N1E6 418 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 SLAMF9Q96A28 289 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 HRASLSQ9HDD0 168 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 ST3GAL6Q9Y274 331 aa22.44■■□□□ 1.18
ATPAF1-202ENST00000371937 A0A1B0GUH1 482 aa22.43■■□□□ 1.18
ATPAF1-202ENST00000371937 LRP5LA4QPB2 252 aa22.43■■□□□ 1.18
ATPAF1-202ENST00000371937 MEIS3P1A6NDR6 274 aa22.43■■□□□ 1.18
ATPAF1-202ENST00000371937 TMEM210A6NLX4 147 aa22.43■■□□□ 1.18
ATPAF1-202ENST00000371937 MFNGO00587 321 aa22.43■■□□□ 1.18
ATPAF1-202ENST00000371937 MPZP25189 248 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms