RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CDH26Q8IXH8 852 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 OR51A2Q8NGJ7 313 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 MRPS26Q9BYN8 205 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 SLITRK2Q9H156 845 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 RASL12Q9NYN1 266 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 DYSFO75923 2080 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 TRAV8-7A0A075B6U6 113 aa13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 MEGF11A6BM72 1044 aa13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 NOS1APO75052 506 aaPredicted RBP13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 LOXL1Q08397 574 aaPredicted RBP13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 ANGPTL5Q86XS5 388 aa13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 MKXQ8IYA7 352 aa13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 SPICQ8N5J4 248 aa13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 NKAIN3Q8N8D7 197 aa13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 POC1AQ8NBT0 407 aa13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 C12orf43Q96C57 262 aaKnown RBP13.05□□□□□ -0.32
PRPF38B-202ENST00000370022 A0A096LNT2 108 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 TRAV38-1A0A0B4J264 116 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 ISPDA4D126 451 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 OOEPA6NGQ2 149 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 RNF223E7ERA6 249 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 LGALS8O00214 317 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 RHBDL1O75783 438 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 HEXAP06865 529 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 PGA5P0DJD9 388 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 SMIM18P0DKX4 95 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 MUC1P15941 1255 aaPredicted RBP13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 SRMP19623 302 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 CPT2P23786 658 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 ZNF93P35789 620 aaPredicted RBP13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 PDZK1IP1Q13113 114 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 ZMYND11Q15326 602 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 AVPI1Q5T686 147 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 DDI2Q5TDH0 399 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 TEX36Q5VZQ5 186 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 SAXO1Q8IYX7 474 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 ZSCAN4Q8NAM6 433 aaPredicted RBP13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 OR52N4Q8NGI2 321 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 ORAI1Q96D31 301 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 METTL17Q9H7H0 456 aaPredicted RBP13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 RHOFQ9HBH0 211 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 STUB1Q9UNE7 303 aa13.04□□□□□ -0.32
PRPF38B-202ENST00000370022 AKR7A2O43488 359 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 NDUFA2O43678 99 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 SYNGR1O43759 233 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 GLRA1P23415 457 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 FGF9P31371 208 aaPredicted RBP13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 MICBQ29980 383 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 ZNF404Q494X3 552 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 FAM27D1Q5T7N8 215 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 SLC25A26Q70HW3 274 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 FAM90A1Q86YD7 464 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 Q8IYB0 196 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 BOLLQ8N9W6 283 aaKnown RBP13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 PNLDC1Q8NA58 520 aaKnown RBP13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 GPER1Q99527 375 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 GAL3ST1Q99999 423 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 NRIP2Q9BQI9 281 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 TMEM165Q9HC07 324 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 SNTG1Q9NSN8 517 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 SSR3Q9UNL2 185 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 IGHV4-61A0A0C4DH41 118 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 MAS1P04201 325 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 CD36P16671 472 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 EGR1P18146 543 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 POU3F4P49335 361 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 ZP1P60852 638 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 HNRNPA0Q13151 305 aaKnown RBP13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 TIMM50Q3ZCQ8 353 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 SATL1Q86VE3 508 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 TMIGD2Q96BF3 282 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 FOXRED1Q96CU9 486 aaPredicted RBP13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 CEP19Q96LK0 163 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 SPACA5Q96QH8 159 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 PPIL3Q9H2H8 161 aaKnown RBP13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 DNAJB11Q9UBS4 358 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 GSTK1Q9Y2Q3 226 aa13.03□□□□□ -0.32
PRPF38B-202ENST00000370022 C3orf80F5H4A9 247 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 TRAPPC2LH3BP13 241 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 H7C1Q1 480 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 ZNF205O95201 554 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 PLATP00750 562 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 CD80P33681 288 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 ERVK11-1P61568 191 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 SMIM21Q3B7S5 101 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 FAM201AQ5SY85 155 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 SFRP4Q6FHJ7 346 aaPredicted RBP13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 CRIP3Q6Q6R5 217 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 GDPGP1Q6ZNW5 385 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 DCDC5Q6ZRR9 648 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 PXT1Q8NFP0 134 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 OR51F2Q8NH61 342 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 CLDND2Q8NHS1 167 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 RFT1Q96AA3 541 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 RAB39BQ96DA2 213 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 COX4I2Q96KJ9 171 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 TMEM246Q9BRR3 403 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 UQCC2Q9BRT2 126 aa13.02□□□□□ -0.33
PRPF38B-202ENST00000370022 HES4Q9HCC6 221 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms