RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 FAHP16930 419 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 C8orf44Q96CB5 159 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 C20orf141Q9NUB4 165 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 CLEC5AQ9NY25 188 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 FCN1O00602 326 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 FGF17O60258 216 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 SLC25A5P05141 298 aaKnown RBP11.21□□□□□ -0.62
HCFC1-202ENST00000369984 FAM27D1Q5T7N8 215 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 ANKLE1Q8NAG6 615 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 OR10C1Q96KK4 312 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 GPR137Q96N19 417 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 TMEM147Q9BVK8 224 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 SRP14P37108 136 aaKnown RBP11.21□□□□□ -0.62
HCFC1-202ENST00000369984 RPS27P42677 84 aaKnown RBP11.21□□□□□ -0.62
HCFC1-202ENST00000369984 SPCS3P61009 180 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 ARL6IP6Q8N6S5 226 aa11.21□□□□□ -0.62
HCFC1-202ENST00000369984 PLEKHB1Q9UF11 243 aaPredicted RBP11.21□□□□□ -0.62
HCFC1-202ENST00000369984 KLF13Q9Y2Y9 288 aaPredicted RBP11.21□□□□□ -0.62
HCFC1-202ENST00000369984 GLDNQ6ZMI3 551 aaPredicted RBP11.2□□□□□ -0.62
HCFC1-202ENST00000369984 OR52L2PQ8NGH6 319 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 ZCCHC14Q8WYQ9 949 aaKnown RBP11.2□□□□□ -0.62
HCFC1-202ENST00000369984 MRGPRX4Q96LA9 322 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 PLXNB2O15031 1838 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 DLEC1Q9Y238 1755 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 A6NDN8 102 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 OR4C46A6NHA9 309 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 GFYI3L273 518 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 ZNF737O75373 536 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 CD200P41217 278 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 MYPOPQ86VE0 399 aaPredicted RBP11.2□□□□□ -0.62
HCFC1-202ENST00000369984 SMIM4Q8WVI0 70 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 MAP6Q96JE9 813 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 TMPRSS13Q9BYE2 586 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 GAL3ST2Q9H3Q3 398 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 TCRBV5S2A0A599 114 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 AP4M1O00189 453 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 SPNS3Q6ZMD2 512 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 AKIP1Q9NQ31 210 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 THAP10Q9P2Z0 257 aaPredicted RBP11.2□□□□□ -0.62
HCFC1-202ENST00000369984 EPHA2P29317 976 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 CEACAM6P40199 344 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 VEGFBP49765 207 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 ASCL1P50553 236 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 LIMK1P53667 647 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 ROBO4Q8WZ75 1007 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 SLC35B3Q9H1N7 401 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 AMDHD2Q9Y303 409 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 C21orf58P58505 322 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 FOXB2Q5VYV0 432 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 NOXO1Q8NFA2 376 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 OR2Z1Q8NG97 314 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 A4GNTQ9UNA3 340 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 ACAA1P09110 424 aaPredicted RBP11.2□□□□□ -0.62
HCFC1-202ENST00000369984 BTG2P78543 158 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 LDLRAD1Q5T700 205 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 CALHM3Q86XJ0 350 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 BAHD1Q8TBE0 780 aaPredicted RBP11.2□□□□□ -0.62
HCFC1-202ENST00000369984 WFDC5Q8TCV5 224 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 WBP2Q969T9 261 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
HCFC1-202ENST00000369984 MAP1LC3CQ9BXW4 147 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 OR2D2Q9H210 308 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 KMT2EQ8IZD2 1858 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 STRCQ7RTU9 1775 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 ADAM20O43506 726 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 CD40P25942 277 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 MEOX2P50222 304 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 PTCRAQ6ISU1 281 aaPredicted RBP11.2□□□□□ -0.62
HCFC1-202ENST00000369984 RGS7BPQ6MZT1 257 aaPredicted RBP11.2□□□□□ -0.62
HCFC1-202ENST00000369984 COPS9Q8WXC6 57 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 MYLKQ15746 1914 aa11.2□□□□□ -0.62
HCFC1-202ENST00000369984 H7C2G1 150 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 M0QZK8 103 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 GGCTO75223 188 aaKnown RBP11.19□□□□□ -0.62
HCFC1-202ENST00000369984 HTR1DP28221 377 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.19□□□□□ -0.62
HCFC1-202ENST00000369984 GPR61Q9BZJ8 451 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 TMEM30CPA0ZSE6 113 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 FAM87AP0C7U9 286 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 TMEM241Q24JQ0 296 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 IP6K3Q96PC2 410 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 ZNF385DQ9H6B1 395 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 ZNF552Q9H707 407 aaPredicted RBP11.19□□□□□ -0.62
HCFC1-202ENST00000369984 RGPD4Q7Z3J3 1758 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 ACAA2P42765 397 aaKnown RBP11.19□□□□□ -0.62
HCFC1-202ENST00000369984 AGERQ15109 404 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 GABRA6Q16445 453 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 ANKRD34AQ69YU3 496 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 TCTN3Q6NUS6 607 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 CAMKMTQ7Z624 323 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 OR4F17Q8NGA8 305 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 MEGF10Q96KG7 1140 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 TAAR9Q96RI9 348 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 ADAT1Q9BUB4 502 aaKnown RBP11.19□□□□□ -0.62
HCFC1-202ENST00000369984 FKBP11Q9NYL4 201 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 LRP12Q9Y561 859 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 LAMB2P55268 1798 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 ABCA7Q8IZY2 2146 aa11.19□□□□□ -0.62
HCFC1-202ENST00000369984 KCNK15Q9H427 330 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms