RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 FUT7Q11130 342 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 PMS2P11Q13670 270 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 JMJD6Q6NYC1 403 aaPredicted RBP14.19□□□□□ -0.14
COL17A1-202ENST00000369733 LINC00696Q6ZRV3 163 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 CORO2AQ92828 525 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 MFNGO00587 321 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 CISD3P0C7P0 127 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 TRIM61Q5EBN2 209 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 DRAM2Q6UX65 266 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 ADAD2Q8NCV1 583 aaKnown RBP14.19□□□□□ -0.14
COL17A1-202ENST00000369733 OR10AC1Q8NH08 325 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 RAB33BQ9H082 229 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 MASP2O00187 686 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 DVL1O14640 695 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 DHRS3O75911 302 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 TAS2R45P59539 299 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 OR11G2Q8NGC1 345 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 OR11H4Q8NGC9 324 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 PLPP3O14495 311 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 ZGLP1P0C6A0 271 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 FAM109BQ6ICB4 259 aaPredicted RBP14.19□□□□□ -0.14
COL17A1-202ENST00000369733 ADPRHL1Q8NDY3 354 aa14.19□□□□□ -0.14
COL17A1-202ENST00000369733 TERTO14746 1132 aaKnown RBP14.18□□□□□ -0.14
COL17A1-202ENST00000369733 SIGLEC5O15389 551 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 CCR5P51681 352 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 SIGLEC14Q08ET2 396 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 MUCL1Q96DR8 90 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 HIF1ANQ9NWT6 349 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 LIPGQ9Y5X9 500 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 MYO9BQ13459 2157 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 MAP1LC3B2A6NCE7 125 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 CXCL13O43927 109 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 HLA-DQB1P01920 261 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 LIMS1P48059 325 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 GUCA2BQ16661 112 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 LSRQ86X29 649 aaPredicted RBP14.18□□□□□ -0.14
COL17A1-202ENST00000369733 RGP1Q92546 391 aaPredicted RBP14.18□□□□□ -0.14
COL17A1-202ENST00000369733 MAP1LC3BQ9GZQ8 125 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 ZFP64Q9NPA5 681 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 AQP7P3A6NL99 342 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 LY86O95711 162 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 CTSDP07339 412 aaPredicted RBP14.18□□□□□ -0.14
COL17A1-202ENST00000369733 ZNF17P17021 662 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 HNRNPA3P51991 378 aaKnown RBP14.18□□□□□ -0.14
COL17A1-202ENST00000369733 ZNF383Q8NA42 475 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 SLC35E1Q96K37 410 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 DSPPQ9NZW4 1301 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 A0A1W2PPE2 198 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 FAM74A7A6NL05 159 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 OR7C2O60412 319 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 CER1O95813 267 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 ARR3P36575 388 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 ZNF816Q0VGE8 651 aaPredicted RBP14.18□□□□□ -0.14
COL17A1-202ENST00000369733 OR8B8Q15620 311 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 FAM74A3Q4VXF1 159 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 ZNF660Q6AZW8 331 aaPredicted RBP14.18□□□□□ -0.14
COL17A1-202ENST00000369733 SMIM15Q7Z3B0 74 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 TECTBQ96PL2 329 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 SDHCQ99643 169 aaPredicted RBP14.18□□□□□ -0.14
COL17A1-202ENST00000369733 PECRQ9BY49 303 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 CBY3A6NI87 242 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 CLDN15P56746 228 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 HIST1H3AP68431 136 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 RGS7BPQ6MZT1 257 aaPredicted RBP14.18□□□□□ -0.14
COL17A1-202ENST00000369733 CD200R1LQ6Q8B3 271 aa14.18□□□□□ -0.14
COL17A1-202ENST00000369733 OR1F12Q8NHA8 337 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 RAB40CQ96S21 281 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 RPL29P47914 159 aaKnown RBP14.17□□□□□ -0.14
COL17A1-202ENST00000369733 GPM6AP51674 278 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 SURF2Q15527 256 aaPredicted RBP14.17□□□□□ -0.14
COL17A1-202ENST00000369733 MARVELD3Q96A59 401 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 MS4A10Q96PG2 267 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 ALX4Q9H161 411 aaPredicted RBP14.17□□□□□ -0.14
COL17A1-202ENST00000369733 PARP11Q9NR21 331 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 VSIG4Q9Y279 399 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 FAM166BA8MTA8 275 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 SOCS1O15524 211 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 ZNF737O75373 536 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 P2RY1P47900 373 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 CLDN23Q96B33 292 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 TAAR6Q96RI8 345 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 DOCK5Q9H7D0 1870 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 CHEK1O14757 476 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 SELEP16581 610 aa14.17□□□□□ -0.14
COL17A1-202ENST00000369733 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.17□□□□□ -0.14
COL17A1-202ENST00000369733 PACRGQ96M98 296 aaPredicted RBP14.17□□□□□ -0.14
COL17A1-202ENST00000369733 AGFG1P52594 562 aaKnown RBP14.16□□□□□ -0.14
COL17A1-202ENST00000369733 ERVFC1-1P60608 527 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 DUSP2Q05923 314 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 RFLNBQ8N5W9 214 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 FAM181AQ8N9Y4 354 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 ATOH1Q92858 354 aaPredicted RBP14.16□□□□□ -0.14
COL17A1-202ENST00000369733 GPR87Q9BY21 358 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 A0A1W2PNV4 684 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 ALG1L2C9J202 215 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 PMCHP20382 165 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 FGF8P55075 233 aaPredicted RBP14.16□□□□□ -0.14
COL17A1-202ENST00000369733 ATG4DQ86TL0 474 aaPredicted RBP14.16□□□□□ -0.14
COL17A1-202ENST00000369733 KCNE4Q8WWG9 221 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 TAAR9Q96RI9 348 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms