RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PRRG4Q9BZD6 226 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 MBD2Q9UBB5 411 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 PTPRQQ9UMZ3 2332 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 PIEZO1Q92508 2521 aa9.34□□□□□ -0.91
TPM3-212ENST00000368533 TMEM82A0PJX8 343 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 C5orf63A6NC05 138 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 A6NLC8 198 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 ZNF736B4DX44 427 aaPredicted RBP9.34□□□□□ -0.92
TPM3-212ENST00000368533 YIF1AO95070 293 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 OR8U8P0C7N1 319 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 F2RL1P55085 397 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 SOX8P57073 446 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 CSNK2A1P68400 391 aaPredicted RBP9.34□□□□□ -0.92
TPM3-212ENST00000368533 CDNFQ49AH0 187 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 CATSPERDQ86XM0 798 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 ARMC10Q8N2F6 343 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 CMBLQ96DG6 245 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 MARS2Q96GW9 593 aaKnown RBP9.34□□□□□ -0.92
TPM3-212ENST00000368533 C20orf24Q9BUV8 137 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 MRPL13Q9BYD1 178 aaKnown RBP9.34□□□□□ -0.92
TPM3-212ENST00000368533 HRH4Q9H3N8 390 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 C12orf49Q9H741 205 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 UFSP2Q9NUQ7 469 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 UPB1Q9UBR1 384 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 SLC5A6Q9Y289 635 aa9.34□□□□□ -0.92
TPM3-212ENST00000368533 KIAA1549Q9HCM3 1950 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 A0A1W2PNV4 684 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 OR14I1A6ND48 311 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 K7EM74 188 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 PMS2P2O95744 297 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 IGHMP01871 453 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 UBBP0CG47 229 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 UBCP0CG48 685 aaKnown RBP9.33□□□□□ -0.92
TPM3-212ENST00000368533 B4GALT1P15291 398 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 CSRP1P21291 193 aaKnown RBP9.33□□□□□ -0.92
TPM3-212ENST00000368533 CPT2P23786 658 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 TAS2R19P59542 299 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 RPS27AP62979 156 aaKnown RBP9.33□□□□□ -0.92
TPM3-212ENST00000368533 UBA52P62987 128 aaKnown RBP9.33□□□□□ -0.92
TPM3-212ENST00000368533 H3F3AP84243 136 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 ZNF584Q8IVC4 421 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 BPIFB2Q8N4F0 458 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 ZIC4Q8N9L1 334 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 OR2V1Q8NHB1 315 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 AKR7LQ8NHP1 331 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 CCDC107Q8WV48 283 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 SPACA5Q96QH8 159 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 ULBP2Q9BZM5 246 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 CRLF2Q9HC73 371 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 NOP16Q9Y3C1 178 aaKnown RBP9.33□□□□□ -0.92
TPM3-212ENST00000368533 R4GMQ9 66 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 NBEAQ8NFP9 2946 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 F5H5K5 113 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 GFRA3O60609 400 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 CD46P15529 392 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 RPA2P15927 270 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 FOXG1P55316 489 aaPredicted RBP9.33□□□□□ -0.92
TPM3-212ENST00000368533 MOGAT2Q3SYC2 334 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 ASPHD2Q6ICH7 369 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 ADAM5Q6NVV9 412 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 SLC36A1Q7Z2H8 476 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 ZNF383Q8NA42 475 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 OR10S1Q8NGN2 331 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 SLAMF6Q96DU3 332 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 SEH1LQ96EE3 360 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 SCNM1Q9BWG6 230 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 PRO1933Q9H354 126 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 B4GALT7Q9UBV7 327 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 LHFPL6Q9Y693 200 aa9.33□□□□□ -0.92
TPM3-212ENST00000368533 A0A096LPE4 126 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 A0A1W2PPZ6 126 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 HSPB2A8KAH6 182 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 DBHP09172 617 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 ABOP16442 354 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 EIF2S3P41091 472 aaKnown RBP9.32□□□□□ -0.92
TPM3-212ENST00000368533 GFRA1P56159 465 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 CXADRP78310 365 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 PMPCAQ10713 525 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 HSPB2Q16082 182 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 TEX30Q5JUR7 227 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 ADGRE4PQ86SQ3 457 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 STX12Q86Y82 276 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 CASTOR1Q8WTX7 329 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 TMED6Q8WW62 240 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 GDF2Q9UK05 429 aaPredicted RBP9.32□□□□□ -0.92
TPM3-212ENST00000368533 PLEKHA6Q9Y2H5 1048 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 MYO7BQ6PIF6 2116 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 MEGF11A6BM72 1044 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 OR2AT4A6NND4 320 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 SYT7O43581 403 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 OR4E1P0C645 316 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 SLC6A9P48067 706 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 RAC3P60763 192 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 NHLH1Q02575 133 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 ROM1Q03395 351 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 AAED1Q7RTV5 226 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 TUSC5Q8IXB3 177 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 ZNF101Q8IZC7 436 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms