RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 F5H5P2 479 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 H3BSA7 217 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 POLR3GO15318 223 aaPredicted RBP5.53□□□□□ -1.52
H3F3A-201ENST00000366813 SEC22BO75396 215 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 SUPT7LO94864 414 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 AK1P00568 194 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 HCKP08631 526 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 LAMP1P11279 417 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 KITLGP21583 273 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 MYCNOSP40205 109 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 RGS6P49758 472 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 VSNL1P62760 191 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 CKAP4Q07065 602 aaKnown RBP5.53□□□□□ -1.52
H3F3A-201ENST00000366813 C2orf54Q08AI8 447 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 FUT5Q11128 374 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 RBM39Q14498 530 aaKnown RBP5.53□□□□□ -1.52
H3F3A-201ENST00000366813 AANATQ16613 207 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 C9orf66Q5T8R8 295 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 DPPA2Q7Z7J5 298 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 C10orf111Q8N326 155 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 SLC35F6Q8N357 371 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 LY6G5BQ8NDX9 201 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 OR7A2PQ8NGA2 310 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 OR5P2Q8WZ92 322 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 TMEM54Q969K7 222 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 ROPN1LQ96C74 230 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 OR51I1Q9H343 314 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 GLTPQ9NZD2 209 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 ATP6V1HQ9UI12 483 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 TMCO1Q9UM00 188 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 STUB1Q9UNE7 303 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 HSPG2P98160 4391 aa5.53□□□□□ -1.52
H3F3A-201ENST00000366813 A0A087WUV0 522 aaPredicted RBP5.52□□□□□ -1.53
H3F3A-201ENST00000366813 A6NDX4 124 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 SEC14L6B5MCN3 397 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 E7ESA3 106 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 ECDO95905 644 aaPredicted RBP5.52□□□□□ -1.53
H3F3A-201ENST00000366813 GYPAP02724 150 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 ALDOBP05062 364 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 RBP1P09455 135 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 DUX4L4P0CJ87 422 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 PRG2P13727 222 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 UQCRBP14927 111 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 NQO1P15559 274 aaKnown RBP5.52□□□□□ -1.53
H3F3A-201ENST00000366813 ZNF32P17041 273 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 SDC1P18827 310 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 SOAT1P35610 550 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 SRP9P49458 86 aaKnown RBP5.52□□□□□ -1.53
H3F3A-201ENST00000366813 BIDP55957 195 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 DLK1P80370 383 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 HSP90B2PQ58FF3 399 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 CLEC12AQ5QGZ9 265 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 MRPL2Q5T653 305 aaKnown RBP5.52□□□□□ -1.53
H3F3A-201ENST00000366813 HCP5Q6MZN7 132 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 C6orf120Q7Z4R8 191 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 EIF1ADQ8N9N8 165 aaKnown RBP5.52□□□□□ -1.53
H3F3A-201ENST00000366813 PSMA8Q8TAA3 256 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 HAVCR1Q96D42 359 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 C4orf45Q96LM5 186 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 FN3KQ9H479 309 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 MEAF6Q9HAF1 191 aa5.52□□□□□ -1.53
H3F3A-201ENST00000366813 A0A087WUJ7 227 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 LGALS8O00214 317 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 ARPC2O15144 300 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 CFLARO15519 480 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 MLNRO43193 412 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 ENTPD5O75356 428 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 AMBPP02760 352 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 GSTM3P21266 225 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 ARHGDIAP52565 204 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 ELF3P78545 371 aaPredicted RBP5.51□□□□□ -1.53
H3F3A-201ENST00000366813 PSG4Q00888 419 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 OR8B8Q15620 311 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 GPAT3Q53EU6 434 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 FAM53AQ6NSI3 398 aaPredicted RBP5.51□□□□□ -1.53
H3F3A-201ENST00000366813 TNFAIP8L2Q6P589 184 aaPredicted RBP5.51□□□□□ -1.53
H3F3A-201ENST00000366813 RNF165Q6ZSG1 346 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 C3orf62Q6ZUJ4 267 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 SLC16A9Q7RTY1 509 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 CCDC91Q7Z6B0 441 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 KLHL7Q8IXQ5 586 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 NKAIN3Q8N8D7 197 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 OR52H1Q8NGJ2 320 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 SETD6Q8TBK2 473 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 SFXN5Q8TD22 340 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 AENQ8WTP8 325 aaKnown RBP5.51□□□□□ -1.53
H3F3A-201ENST00000366813 PYROXD1Q8WU10 500 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.51□□□□□ -1.53
H3F3A-201ENST00000366813 CCT7Q99832 543 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 POLE3Q9NRF9 147 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 UFSP2Q9NUQ7 469 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 INTS9Q9NV88 658 aaKnown RBP5.51□□□□□ -1.53
H3F3A-201ENST00000366813 STK38LQ9Y2H1 464 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 STARD10Q9Y365 291 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 SAR1BQ9Y6B6 198 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 VPS13DQ5THJ4 4388 aa5.51□□□□□ -1.53
H3F3A-201ENST00000366813 A0A096LPI6 279 aa5.5□□□□□ -1.53
H3F3A-201ENST00000366813 A0A1W2PRQ8 180 aa5.5□□□□□ -1.53
H3F3A-201ENST00000366813 TRIM64CA6NLI5 447 aa5.5□□□□□ -1.53
H3F3A-201ENST00000366813 HLA-DPB1P04440 258 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms