RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 NAGKQ9UJ70 344 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 SLC45A2Q9UMX9 530 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 PHIPQ8WWQ0 1821 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 DEFB108AA8MXU0 73 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 ETHE1O95571 254 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 ZNF17P17021 662 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 PTGFRP43088 359 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 FCN2Q15485 313 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 ARRDC1Q8N5I2 433 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 ARID1BQ8NFD5 2236 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-203ENST00000361654 KNL1Q8NG31 2342 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 IGHV5-10-1A0A0J9YXX1 117 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 PATE3B3GLJ2 98 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 GNG7O60262 68 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 TBX19O60806 448 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 ONECUT2O95948 504 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 GIPP09681 153 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-203ENST00000361654 GGTLC2Q14390 218 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 TOR2AQ5JU69 321 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 TUSC5Q8IXB3 177 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 CHAC2Q8WUX2 184 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 GPR78Q96P69 363 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 GABARAPL3Q9BY60 117 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 CES1P1Q9UKY3 287 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 PAPPAQ13219 1627 aa9.76□□□□□ -0.85
CLIP1-203ENST00000361654 A0A0B4J2E0 115 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 A0A1B0GX12 115 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 DLL1O00548 723 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 PPP1R2P9O14990 202 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 TGOLN2O43493 480 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 TXNDC12O95881 172 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 SP1P08047 785 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 FAM3AP98173 230 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 PMP22Q01453 160 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 MYEOVQ96EZ4 313 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 UQCC1Q9NVA1 299 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 ING1Q9UK53 422 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-203ENST00000361654 SLC25A5P05141 298 aaKnown RBP9.75□□□□□ -0.85
CLIP1-203ENST00000361654 M6PRP20645 277 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 METAP1P53582 386 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 FAHD2BQ6P2I3 314 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-203ENST00000361654 TMEM123Q8N131 208 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 FADS6Q8N9I5 356 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 FAHD2AQ96GK7 314 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 RNF2Q99496 336 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 MAGT1Q9H0U3 335 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 TMEM30AQ9NV96 361 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 OR2T8A6NH00 312 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 SIX6O95475 246 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 LPAR6P43657 344 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 ACOT7LQ6ZUV0 252 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 TGIF2LYQ8IUE0 185 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 TGIF2LXQ8IUE1 241 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 RPUSD4Q96CM3 377 aaKnown RBP9.75□□□□□ -0.85
CLIP1-203ENST00000361654 UQCC2Q9BRT2 126 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 CDCA4Q9BXL8 241 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 INSIG2Q9Y5U4 225 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 ADAM10O14672 748 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 NTF3P20783 257 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 IGFBP6P24592 240 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-203ENST00000361654 CTGFP29279 349 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 CDK5Q00535 292 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 ZNF239Q16600 458 aaKnown RBP9.75□□□□□ -0.85
CLIP1-203ENST00000361654 OR6X1Q8NH79 312 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 MARCH1Q8TCQ1 289 aa9.75□□□□□ -0.85
CLIP1-203ENST00000361654 C11orf54Q9H0W9 315 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-203ENST00000361654 SLC17A2O00624 439 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 SIAH2O43255 324 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 AREGP15514 252 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 GZMHP20718 246 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 RPL30P62888 115 aaKnown RBP9.74□□□□□ -0.85
CLIP1-203ENST00000361654 TMUB2Q71RG4 321 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 SLC25A42Q86VD7 318 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 MOGAT3Q86VF5 341 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 ZFP62Q8NB50 900 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-203ENST00000361654 PIMREGQ9BSJ6 248 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 PIGMQ9H3S5 423 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 LPAR2Q9HBW0 351 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 MAGEB4O15481 346 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-203ENST00000361654 GP1BAP07359 652 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 KISS1Q15726 138 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 GAB4Q2WGN9 574 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 H3F3CQ6NXT2 135 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 NUDT8Q8WV74 236 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 SMIM7Q9BQ49 75 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 CFHR5Q9BXR6 569 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 FBXO8Q9NRD0 319 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 C9orf172C9J069 976 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 G3V3Q6 166 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 PGA3P0DJD8 388 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 DRD3P35462 400 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 B4GALNT1Q00973 533 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 BTN1A1Q13410 526 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 IZUMO4Q1ZYL8 232 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 FAHD1Q6P587 224 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 SHISA5Q8N114 240 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 C11orf42Q8N5U0 333 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 SCARB1Q8WTV0 552 aa9.74□□□□□ -0.85
CLIP1-203ENST00000361654 KNTC1P50748 2209 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms