RNA–Protein interactions for RNA: ENST00000355233.9

PTPRD-201, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-201ENST00000355233 ARSDP51689 593 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 UCP3P55916 312 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HLA-DRB3P79483 266 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TMEM176BQ3YBM2 270 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 DHRS7BQ6IAN0 325 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 DMBX1Q8NFW5 382 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SPACA9Q96E40 222 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GRAMD2BQ96HH9 432 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 MIXL1Q9H2W2 232 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 AUNIPQ9H7T9 357 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 OR6C3Q9NZP0 311 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TAAR2Q9P1P5 351 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 FBXO4Q9UKT5 387 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 TRAPPC2LQ9UL33 140 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 CARHSP1Q9Y2V2 147 aaKnown RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SLC17A3O00476 420 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GALR2O43603 387 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 IGFBP1P08833 259 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 OR8G3PP0DMU2 310 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GABRA1P14867 456 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 ORM2P19652 201 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 SHC1P29353 583 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GNG4P50150 75 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GPNMBQ14956 572 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 AGERQ15109 404 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 NRN1LQ496H8 165 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 LIMS2Q7Z4I7 341 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GCM1Q9NP62 436 aa4.42□□□□□ -1.7
PTPRD-201ENST00000355233 GDF2Q9UK05 429 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 HEATR1Q9H583 2144 aaKnown RBP4.42□□□□□ -1.7
PTPRD-201ENST00000355233 VWA8A3KMH1 1905 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 CTXND1A0A1B0GTU2 59 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 C9orf170A2RU37 121 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 ZNF732B4DXR9 585 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 DCTN6O00399 190 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OR5I1Q13606 314 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 RAB6CQ53S08 254 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OSR2Q8N2R0 312 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OR52I2Q8NH67 350 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 RAB6CQ9H0N0 254 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 TECRQ9NZ01 308 aaKnown RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 MRPS2Q9Y399 296 aaKnown RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 CHST2Q9Y4C5 530 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 DOCK3Q8IZD9 2030 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 GPX5O75715 221 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 UCNP55089 124 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 SNU13P55769 128 aaKnown RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 TCF23Q7RTU1 214 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 ZDHHC23Q8IYP9 409 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 LMF1Q96S06 567 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 VSX1Q9NZR4 365 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 ALPK3Q96L96 1907 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 A0A0A6YYD5 115 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 C11orf98E9PRG8 122 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 FAM72CH0Y354 149 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 SHBQ15464 509 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 LPAL2Q16609 132 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 FAM72AQ5TYM5 149 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 FAM72DQ6L9T8 149 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 FAM72BQ86X60 149 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 CLDN19Q8N6F1 224 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 CELF2-AS1Q8N7Q2 184 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OR4D6Q8NGJ1 314 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 RTN4IP1Q8WWV3 396 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 ZG16BQ96DA0 208 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 LOXL4Q96JB6 756 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 MEGF10Q96KG7 1140 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 GAB2Q9UQC2 676 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 PNLIPP16233 465 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 CEACAM3P40198 252 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 AMTP48728 403 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 KCNAB1Q14722 419 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 TMEM81Q6P7N7 255 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 LRRTM1Q86UE6 522 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OR5M1Q8NGP8 315 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OR4F5Q8NH21 305 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 MS4A6EQ96DS6 147 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 DERL3Q96Q80 235 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OR4F4Q96R69 305 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 MRPL32Q9BYC8 188 aaKnown RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 ZNF552Q9H707 407 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 DOCK11Q5JSL3 2073 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 C5orf67F2Z3F1 127 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 CCSO14618 274 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 SCO1O75880 301 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 COX6CP09669 75 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 USF1P22415 310 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 C9orf50Q5SZB4 431 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 TMEFF1Q8IYR6 380 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OR8D4Q8NGM9 314 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OR13C9Q8NGT0 318 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 TOMM40LQ969M1 308 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 MS4A10Q96PG2 267 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 OVOL2Q9BRP0 275 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 PARD6AQ9NPB6 346 aa4.41□□□□□ -1.7
PTPRD-201ENST00000355233 HEYLQ9NQ87 328 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 KLF13Q9Y2Y9 288 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-201ENST00000355233 SPTBP11277 2137 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms