RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 SLC35G3Q8N808 338 aa9.59□□□□□ -0.87
SND1-201ENST00000354725 OR1J1Q8NGS3 322 aa9.59□□□□□ -0.87
SND1-201ENST00000354725 LMF2Q9BU23 707 aaKnown RBP9.59□□□□□ -0.87
SND1-201ENST00000354725 HEBP2Q9Y5Z4 205 aa9.59□□□□□ -0.87
SND1-201ENST00000354725 TRAV27A0A087WT01 109 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 TMEM272A0A1B0GTI8 110 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 OR4A8P0C604 315 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 CD27P26842 260 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 TFPI2P48307 235 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 RAB1AP62820 205 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 GUK1Q16774 197 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 TMPPEQ6ZT21 453 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 SLC36A1Q7Z2H8 476 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 GRINAQ7Z429 371 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 MYPOPQ86VE0 399 aaPredicted RBP9.58□□□□□ -0.88
SND1-201ENST00000354725 SECTM1Q8WVN6 248 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 ASB5Q8WWX0 329 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 OR5B2Q96R09 309 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 TP53RKQ96S44 253 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 SLITRK2Q9H156 845 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 ZNF160Q9HCG1 818 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 FOXJ3Q9UPW0 622 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 MED31Q9Y3C7 131 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 NPIPA5A0A0B4J1W7 369 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 PRR32B1ATL7 298 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 NPIPA5E9PKD4 350 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 NPIPA3F8WFD2 350 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 H0Y8G0 127 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 J3QLW9 94 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 ARPC3O15145 178 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 CTSVO60911 334 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 ARL6IP5O75915 188 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 EML2O95834 649 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 ZNF19P17023 458 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 PAX5Q02548 391 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 SHBQ15464 509 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 COL5A1-AS1Q5SY13 56 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 LINC01590Q5TEZ4 76 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 SLC23A3Q6PIS1 610 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 DRAM2Q6UX65 266 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 ZAR1Q86SH2 424 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 SHISA5Q8N114 240 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 NPEPL1Q8NDH3 523 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 TMEM52Q8NDY8 209 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 OR9A4Q8NGU2 314 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 LGALS14Q8TCE9 139 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 FAM222BQ8WU58 562 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 NPIPA1Q9UND3 350 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 MMP24Q9Y5R2 645 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 HS3ST3A1Q9Y663 406 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 A0A1W2PQU0 124 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 FIGNL2A6NMB9 653 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 IFITM5A6NNB3 132 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 RIIAD1A6NNX1 92 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 SCGNO76038 276 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 NDUFB6O95139 128 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 CHRNB4P30926 498 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 ACVR1BP36896 505 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 RPS23P62266 143 aaKnown RBP9.58□□□□□ -0.88
SND1-201ENST00000354725 C1orf194Q5T5A4 169 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 ESPNLQ6ZVH7 1005 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 TMEFF1Q8IYR6 380 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 TMEM104Q8NE00 496 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 OR5AP2Q8NGF4 316 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 OR51L1Q8NGJ5 315 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 OR5L2Q8NGL0 311 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 OR13D1Q8NGV5 346 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 RAB1CQ92928 201 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 PRRT1Q99946 306 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 SYT3Q9BQG1 590 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 SRSF8Q9BRL6 282 aaKnown RBP9.58□□□□□ -0.88
SND1-201ENST00000354725 OR2J1Q9GZK6 312 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 PHPT1Q9NRX4 125 aaPredicted RBP9.58□□□□□ -0.88
SND1-201ENST00000354725 ADAM18Q9Y3Q7 739 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 SCN2AQ99250 2005 aa9.58□□□□□ -0.88
SND1-201ENST00000354725 GNG7O60262 68 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 PPP1R3DO95685 299 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 FCGR3AP08637 254 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 MRPL3P09001 348 aaKnown RBP9.57□□□□□ -0.88
SND1-201ENST00000354725 CXCR1P25024 350 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 CASRP41180 1078 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 EFNA3P52797 238 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 DVL1P1P54792 670 aaPredicted RBP9.57□□□□□ -0.88
SND1-201ENST00000354725 PRRT3Q5FWE3 981 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 ABHD17BQ5VST6 288 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 MUC20Q8N307 709 aaPredicted RBP9.57□□□□□ -0.88
SND1-201ENST00000354725 TNFAIP8L1Q8WVP5 186 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 SAT2Q96F10 170 aaPredicted RBP9.57□□□□□ -0.88
SND1-201ENST00000354725 TMEM56Q96MV1 263 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 MICU1Q9BPX6 476 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 SLC17A9Q9BYT1 436 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 LPAR3Q9UBY5 353 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 TMEM56-RWDD3S4R434 201 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 KIR2DL5BA0A0G2JN68 375 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 KIR2DL5BA0A0G2JPC4 375 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 AQP7P3A6NL99 342 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 PYCARD-AS1I3L0S3 204 aa9.57□□□□□ -0.88
SND1-201ENST00000354725 ABHD16AO95870 558 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms