RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 COMMD2Q86X83 199 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 ZNF100Q8IYN0 542 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 LRRC18Q8N456 261 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 PAQR4Q8N4S7 273 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 OR4C16Q8NGL9 310 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 ABHD3Q8WU67 409 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 AQP3Q92482 292 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 GCDHQ92947 438 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 SEH1LQ96EE3 360 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 ZNF837Q96EG3 531 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 CPNE2Q96FN4 548 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 ZNF486Q96H40 463 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 FAM71F1Q96KD3 344 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 C1orf147Q96MC9 270 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 ALKBH3Q96Q83 286 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 OR2H1Q9GZK4 316 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 WNT5BQ9H1J7 359 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 MED28Q9H204 178 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 OR51J1Q9H342 316 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 ESRP2Q9H6T0 727 aaKnown RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 ZDHHC11Q9H8X9 412 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 UBTD1Q9HAC8 227 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 RANGRFQ9HD47 186 aaPredicted RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 MCUBQ9NWR8 336 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 TMEM160Q9NX00 188 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 PTTG3PQ9NZH4 202 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 ZNF224Q9NZL3 707 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 ANAPC10Q9UM13 185 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 MRPS28Q9Y2Q9 187 aaKnown RBP7.08□□□□□ -1.28
CD44-205ENST00000352818 ZNF175Q9Y473 711 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 TIMM10BQ9Y5J6 103 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 MED12Q93074 2177 aa7.08□□□□□ -1.28
CD44-205ENST00000352818 TRAV6A0A075B6T7 132 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 IGKV1-9A0A0C4DH69 117 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 FIGNL2A6NMB9 653 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 ZNF587BE7ETH6 402 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 F5H5K5 113 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 RAB27BO00194 218 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 RGS13O14921 159 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 ICMTO60725 284 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 SULT1A3P0DMM9 295 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 SULT1A4P0DMN0 295 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 PTHLHP12272 177 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 ZNF32P17041 273 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 TBPP20226 339 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 ANOS1P23352 680 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 LOXP28300 417 aaPredicted RBP7.07□□□□□ -1.28
CD44-205ENST00000352818 ERP29P30040 261 aaKnown RBP7.07□□□□□ -1.28
CD44-205ENST00000352818 SLC6A9P48067 706 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 TAS2R19P59542 299 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 SORDQ00796 357 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 SLC10A1Q14973 349 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 ZMYND11Q15326 602 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 RBMS2Q15434 407 aaKnown RBP7.07□□□□□ -1.28
CD44-205ENST00000352818 CLEC12BQ2HXU8 276 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 ZBTB37Q5TC79 503 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 TSPO2Q5TGU0 170 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 SEZ6L2Q6UXD5 910 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 SLC16A14Q7RTX9 510 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 NOXA1Q86UR1 476 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 GABRG1Q8N1C3 465 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 PNLDC1Q8NA58 520 aaKnown RBP7.07□□□□□ -1.28
CD44-205ENST00000352818 KCNG3Q8TAE7 436 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 GIMAP1Q8WWP7 306 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 SPSB1Q96BD6 273 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 HS3ST6Q96QI5 342 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 SOX7Q9BT81 388 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 PRDM14Q9GZV8 571 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.07□□□□□ -1.28
CD44-205ENST00000352818 FREM1Q5H8C1 2179 aa7.07□□□□□ -1.28
CD44-205ENST00000352818 RAI1Q7Z5J4 1906 aaPredicted RBP7.07□□□□□ -1.28
CD44-205ENST00000352818 TRGV5A0A0B4J1U4 118 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 C5orf63A6NC05 138 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 SNRPGP15A8MWD9 76 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 XRCC2O43543 280 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 CDC14BO60729 498 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 CA11O75493 328 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 IGHG3P01860 377 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 HCKP08631 526 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 GSTP1P09211 210 aaKnown RBP7.06□□□□□ -1.28
CD44-205ENST00000352818 NAT2P11245 290 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 FCGR2AP12318 317 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 ANXA3P12429 323 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 GTF2F2P13984 249 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 B4GALT1P15291 398 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 HTR5AP47898 357 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 GZMKP49863 264 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 PSG4Q00888 419 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 CD83Q01151 205 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 GUCA2AQ02747 115 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 HGFACQ04756 655 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 MEF2DQ14814 521 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 FCN2Q15485 313 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 MOGAT2Q3SYC2 334 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 TMEM42Q69YG0 159 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 ZNF774Q6NX45 483 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 STEAP1BQ6NZ63 245 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 CRIP3Q6Q6R5 217 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 GLIPR1L1Q6UWM5 242 aa7.06□□□□□ -1.28
CD44-205ENST00000352818 GLDNQ6ZMI3 551 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms