RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ONECUT1Q9UBC0 465 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 GHRLQ9UBU3 117 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 TRAV39A0A0B4J263 110 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 PRR19A6NJB7 356 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 OR4C45A6NMZ5 311 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 NDUFB3O43676 98 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 DXOO77932 396 aaKnown RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 RECKO95980 971 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 OXA1LQ15070 435 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 RBMXL1Q96E39 390 aaKnown RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 MTCL1Q9Y4B5 1905 aaKnown RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 TUBAL3A6NHL2 446 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 NKX2-1P43699 371 aaPredicted RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 RPS16P62249 146 aaKnown RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 HFEQ30201 348 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 MRPS24Q96EL2 167 aaKnown RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 GLRX2Q9NS18 164 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 TCF20Q9UGU0 1960 aaKnown RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 TRGV10A0A0A0MS01 117 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 LIMS1P48059 325 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 SPANXN5Q5MJ07 72 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 CST9LP1Q5W188 147 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 CCDC190Q86UF4 302 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 SLC25A40Q8TBP6 338 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 GMPPAQ96IJ6 420 aaPredicted RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 S1PR3Q99500 378 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 SIRT4Q9Y6E7 314 aaPredicted RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 CTAG2O75638 210 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 IGHA1P01876 353 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 OR4E1P0C645 316 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 FAM87AP0C7U9 286 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 IAPPP10997 89 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 UCNP55089 124 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 NANOS3P60323 173 aaKnown RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 RHEBQ15382 184 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 TIPARPQ7Z3E1 657 aaKnown RBP12.06□□□□□ -0.48
SMC6-201ENST00000351948 OR2J1Q9GZK6 312 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 ADAM19Q9H013 955 aa12.06□□□□□ -0.48
SMC6-201ENST00000351948 H3BP45 60 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 NUPL2O15504 423 aaKnown RBP12.05□□□□□ -0.48
SMC6-201ENST00000351948 CST2P09228 141 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 TMPRSS3P57727 454 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 ARHGEF39Q8N4T4 335 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 ZFP62Q8NB50 900 aaPredicted RBP12.05□□□□□ -0.48
SMC6-201ENST00000351948 SHARPINQ9H0F6 387 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 DIDO1Q9BTC0 2240 aaKnown RBP12.05□□□□□ -0.48
SMC6-201ENST00000351948 SERPINE3A8MV23 424 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 HIST1H1DP16402 221 aaKnown RBP12.05□□□□□ -0.48
SMC6-201ENST00000351948 RAB4BP61018 213 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 IGLV3-21P80748 117 aaPredicted RBP12.05□□□□□ -0.48
SMC6-201ENST00000351948 ZNF92Q03936 586 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 KRBOX4Q5JUW0 171 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 PINX1Q96BK5 328 aaKnown RBP12.05□□□□□ -0.48
SMC6-201ENST00000351948 UBTD1Q9HAC8 227 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 FAM96BQ9Y3D0 163 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 C16orf97H3BN30 126 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 PYCARD-AS1I3L0S3 204 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 YIF1AO95070 293 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 ZIC2O95409 532 aaPredicted RBP12.05□□□□□ -0.48
SMC6-201ENST00000351948 ZNF528Q3MIS6 628 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 LRRC10Q5BKY1 277 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 MRGPRDQ8TDS7 321 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 RNF133Q8WVZ7 376 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 ITPKCQ96DU7 683 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 ZNF883P0CG24 379 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 RPS4XP62701 263 aaKnown RBP12.05□□□□□ -0.48
SMC6-201ENST00000351948 MOGAT3Q86VF5 341 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 UBAC2Q8NBM4 344 aa12.05□□□□□ -0.48
SMC6-201ENST00000351948 A0A0G2JMM0 328 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 A0A1W2PPB8 328 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 A0A1W2PRS3 328 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 KIR3DP1A8MWS1 328 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 LRP3O75074 770 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 CALCRP30988 508 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 ABHD1Q96SE0 405 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 SRXN1Q9BYN0 137 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 CSAG2Q9Y5P2 127 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 ADAM10O14672 748 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 SSSCA1O60232 199 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 COX7A1P24310 79 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 S100A2P29034 98 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 ELLP55199 621 aaPredicted RBP12.04□□□□□ -0.48
SMC6-201ENST00000351948 HBG1P69891 147 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 HBG2P69892 147 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 SLC36A1Q7Z2H8 476 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 CATSPERDQ86XM0 798 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 RBMXL3Q8N7X1 1067 aaKnown RBP12.04□□□□□ -0.48
SMC6-201ENST00000351948 ADAT3Q96EY9 351 aaPredicted RBP12.04□□□□□ -0.48
SMC6-201ENST00000351948 UQCC2Q9BRT2 126 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 IGKV1D-42A0A075B6H8 117 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 TMEM30CPA0ZSE6 113 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 ANKRD34BA5PLL1 514 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 ST8SIA3O43173 380 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 RAMP1O60894 148 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 OR2F2O95006 317 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 TMEM11P17152 192 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 ECI1P42126 302 aa12.04□□□□□ -0.48
SMC6-201ENST00000351948 OR6S1Q8NH40 331 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms