RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ARL6IP1Q15041 203 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 PNLIPRP3Q17RR3 467 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 ZNF718Q3SXZ3 478 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 ALKBH2Q6NS38 261 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 SLC25A26Q70HW3 274 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 SSX8Q7RTT4 187 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 GLCCI1Q86VQ1 547 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 CADM3Q8N126 398 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 DVL3Q92997 716 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 NPAP1Q9NZP6 1156 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 ZNF107Q9UII5 783 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 ELF5Q9UKW6 265 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 SPEF1Q9Y4P9 236 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 NCOR2Q9Y618 2525 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 FOXI3A8MTJ6 420 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 CRYAAP02489 173 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 CCKARP32238 428 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 MPV17P39210 176 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 HAAOP46952 286 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 TMEM50BP56557 158 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 PLAC9Q5JTB6 97 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 RSBN1Q5VWQ0 802 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 FJX1Q86VR8 437 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 ZNF573Q86YE8 665 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 MKXQ8IYA7 352 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 OSR2Q8N2R0 312 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 MICU1Q9BPX6 476 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 MARVELD1Q9BSK0 173 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 RTL8AQ9BWD3 113 aa18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 PURGQ9UJV8 347 aaKnown RBP18.38■□□□□ 0.53
TSPAN3-202ENST00000346495 MFNGO00587 321 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 CYB5AP00167 134 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 GIFP27352 417 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 BLVRBP30043 206 aaPredicted RBP18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 GCH1P30793 250 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 TMEM255AQ5JRV8 349 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 MBNL2Q5VZF2 373 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 TMEM200AQ86VY9 491 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 TMEM229BQ8NBD8 167 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 OR8S1Q8NH09 359 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 CREB3L1Q96BA8 519 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 ARHGAP5-AS1Q96IT6 56 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 CACNG6Q9BXT2 260 aa18.37■□□□□ 0.53
TSPAN3-202ENST00000346495 SHANK1Q9Y566 2161 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 AKR7A2O43488 359 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 AKAIN1P0CW23 69 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 KITLGP21583 273 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 RCVRNP35243 200 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 TAS2R19P59542 299 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 GNG2P59768 71 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 TRAPPC6BQ86SZ2 158 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 POM121Q96HA1 1249 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 OSGIN2Q9Y236 505 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 NUBP2Q9Y5Y2 271 aa18.36■□□□□ 0.53
TSPAN3-202ENST00000346495 GABRR1P24046 479 aa18.35■□□□□ 0.53
TSPAN3-202ENST00000346495 Q8NFD4 153 aa18.35■□□□□ 0.53
TSPAN3-202ENST00000346495 OR8G5Q8NG78 346 aa18.35■□□□□ 0.53
TSPAN3-202ENST00000346495 UPRTQ96BW1 309 aa18.35■□□□□ 0.53
TSPAN3-202ENST00000346495 ADAT1Q9BUB4 502 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-202ENST00000346495 PECRQ9BY49 303 aa18.35■□□□□ 0.53
TSPAN3-202ENST00000346495 TMEM100Q9NV29 134 aa18.35■□□□□ 0.53
TSPAN3-202ENST00000346495 CCL21O00585 134 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 TCRBP04435 133 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 SFTPBP07988 381 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 ALKBH6Q3KRA9 238 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 RGS7BPQ6MZT1 257 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 NUDCD2Q8WVJ2 157 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 SLAMF9Q96A28 289 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 PPP1R14BQ96C90 147 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 PKIBQ9C010 78 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 MCUBQ9NWR8 336 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 KCNK7Q9Y2U2 307 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 INMT-MINDY4F8WBC2 141 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 TIMM8AO60220 97 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 FABP6P51161 128 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 CCR6P51684 374 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 OR8G1Q15617 311 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 ELP2Q6IA86 826 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 STEAP1BQ6NZ63 245 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 HAGHLQ6PII5 290 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 SEZ6L2Q6UXD5 910 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 RTN4RL2Q86UN3 420 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 FBXL14Q8N1E6 418 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 OR4C16Q8NGL9 310 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 OR51I2Q9H344 312 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 IFT46Q9NQC8 304 aa18.34■□□□□ 0.53
TSPAN3-202ENST00000346495 TLN1Q9Y490 2541 aaKnown RBP18.33■□□□□ 0.53
TSPAN3-202ENST00000346495 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 SERPINE3A8MV23 424 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 TRAPPC2LH3BP13 241 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 SSX5O60225 188 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 CA11O75493 328 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 PPP3CBP16298 524 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 CBX5P45973 191 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 BTG1P62324 171 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 IL24Q13007 206 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 ARFRP1Q13795 201 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 TAF9Q16594 264 aa18.33■□□□□ 0.52
TSPAN3-202ENST00000346495 SFRP4Q6FHJ7 346 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms