RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 UBE2V2Q15819 145 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 C6orf201Q7Z4U5 140 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 MRGPREQ86SM8 312 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 RPS19BP1Q86WX3 136 aaKnown RBP15.59■□□□□ 0.09
SPAST-202ENST00000345662 SLC52A3Q9NQ40 469 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 CNN1P51911 297 aaKnown RBP15.59■□□□□ 0.09
SPAST-202ENST00000345662 RAC1P63000 192 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 IL24Q13007 206 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 CCDC74BQ96LY2 380 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 TMEM9BQ9NQ34 198 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 HDGFL3Q9Y3E1 203 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 H3BQ15 152 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 MBPP02686 304 aaPredicted RBP15.59■□□□□ 0.09
SPAST-202ENST00000345662 OR3A4PP47883 348 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 TCTN1Q2MV58 587 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 LYSMD4Q5XG99 296 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 VHLLQ6RSH7 139 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 OR51M1Q9H341 326 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 DUSP13Q9UII6 198 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 ITGB4P16144 1822 aa15.59■□□□□ 0.09
SPAST-202ENST00000345662 ACAA1P09110 424 aaPredicted RBP15.58■□□□□ 0.09
SPAST-202ENST00000345662 OR5G3P0C626 314 aa15.58■□□□□ 0.09
SPAST-202ENST00000345662 C5orf49A4QMS7 147 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 NRG2O14511 850 aaPredicted RBP15.58■□□□□ 0.08
SPAST-202ENST00000345662 ADPRHL1Q8NDY3 354 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 FAAP24Q9BTP7 215 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 FKBP11Q9NYL4 201 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 PRR13Q9NZ81 148 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 DBX1A6NMT0 343 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 ABCD4O14678 606 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 SELEP16581 610 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 ZNF154Q13106 437 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 C6orf106Q9H6K1 298 aaPredicted RBP15.58■□□□□ 0.08
SPAST-202ENST00000345662 ANKRD34CP0C6C1 535 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 BPIFB3P59826 476 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 ZNF770Q6IQ21 691 aaPredicted RBP15.58■□□□□ 0.08
SPAST-202ENST00000345662 Q6ZN92 141 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 ZNRF4Q8WWF5 429 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 FBXO17Q96EF6 278 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 ASB16Q96NS5 453 aa15.58■□□□□ 0.08
SPAST-202ENST00000345662 YIF1AO95070 293 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 PRICKLE4Q2TBC4 344 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 NEIL1Q96FI4 390 aaPredicted RBP15.57■□□□□ 0.08
SPAST-202ENST00000345662 LOC102723971A0A1B0GUV8 181 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 ZFP36L2P47974 494 aaKnown RBP15.57■□□□□ 0.08
SPAST-202ENST00000345662 YRDCQ86U90 279 aaKnown RBP15.57■□□□□ 0.08
SPAST-202ENST00000345662 NHSQ6T4R5 1651 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 SSC5DA1L4H1 1573 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 DHRS3O75911 302 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 SEC11BP0C7V7 166 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 FGF8P55075 233 aaPredicted RBP15.57■□□□□ 0.08
SPAST-202ENST00000345662 ZNF117Q03924 483 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 ZNF816Q0VGE8 651 aaPredicted RBP15.57■□□□□ 0.08
SPAST-202ENST00000345662 OR8B8Q15620 311 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 C17orf78Q8N4C9 275 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 LINC01555Q8NAE3 123 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 HLA-CQ95604 372 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 CLDN23Q96B33 292 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 ANAPC16Q96DE5 110 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 ANKRD10Q9NXR5 420 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 KNL1Q8NG31 2342 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 OR4C45A6NMZ5 311 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 FAM166BA8MTA8 275 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 ZBTB25P24278 435 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 ARR3P36575 388 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 FUT7Q11130 342 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 DCAF12L2Q5VW00 463 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 NPEPL1Q8NDH3 523 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 OR11G2Q8NGC1 345 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 PRSS50Q9UI38 385 aa15.57■□□□□ 0.08
SPAST-202ENST00000345662 VSIG10L2P0DP72 767 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 IL3RAP26951 378 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 POLR2GP62487 172 aaKnown RBP eCLIP15.56■□□□□ 0.08
SPAST-202ENST00000345662 MOB1BQ7L9L4 216 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 RGP1Q92546 391 aaPredicted RBP15.56■□□□□ 0.08
SPAST-202ENST00000345662 GPA33Q99795 319 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 ZFP64Q9NPA5 681 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 SERTM2A0A1B0GWG4 89 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 GEMIN2O14893 280 aaKnown RBP15.56■□□□□ 0.08
SPAST-202ENST00000345662 NTN1O95631 604 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 HLA-DQB1P01920 261 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 OR10J1P30954 320 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 CAPZBP47756 277 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 CYB561P49447 251 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 OR11H4Q8NGC9 324 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 TRIB1Q96RU8 372 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 DYNLRB1Q9NP97 96 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 OR2W5A6NFC9 320 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 MUC1P15941 1255 aaPredicted RBP15.56■□□□□ 0.08
SPAST-202ENST00000345662 CRISP2P16562 243 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 AMTP48728 403 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 CASP6P55212 293 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 RNASEKQ6P5S7 137 aaKnown RBP15.56■□□□□ 0.08
SPAST-202ENST00000345662 ROBO4Q8WZ75 1007 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 LSM11P83369 360 aaKnown RBP eCLIP15.56■□□□□ 0.08
SPAST-202ENST00000345662 TIPARPQ7Z3E1 657 aaKnown RBP15.56■□□□□ 0.08
SPAST-202ENST00000345662 C12orf49Q9H741 205 aa15.56■□□□□ 0.08
SPAST-202ENST00000345662 TRAV8-7A0A075B6U6 113 aa15.55■□□□□ 0.08
SPAST-202ENST00000345662 GALR2O43603 387 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms