RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MANBALQ9NQG1 85 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 SIRT4Q9Y6E7 314 aaPredicted RBP16.13■□□□□ 0.17
SMC4-201ENST00000344722 TRAV34A0A0B4J273 112 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 GEMIN2O14893 280 aaKnown RBP16.12■□□□□ 0.17
SMC4-201ENST00000344722 GPR12P47775 334 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 FUT7Q11130 342 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 ZNF141Q15928 474 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 PRICKLE4Q2TBC4 344 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 MRGPREQ86SM8 312 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 HHIPQ96QV1 700 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 OR4C45A6NMZ5 311 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 SIRPB1O00241 398 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 RRP8O43159 456 aaKnown RBP16.12■□□□□ 0.17
SMC4-201ENST00000344722 ISXQ2M1V0 245 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 OR11L1Q8NGX0 322 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 ABCA3Q99758 1704 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 IGHV3-20A0A0C4DH32 117 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 SELEP16581 610 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 CNN1P51911 297 aaKnown RBP16.12■□□□□ 0.17
SMC4-201ENST00000344722 RPEL1Q2QD12 228 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 VSIG4Q9Y279 399 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 CLN3Q13286 438 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 MOB1BQ7L9L4 216 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 FBXL14Q8N1E6 418 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 ADAD2Q8NCV1 583 aaKnown RBP16.12■□□□□ 0.17
SMC4-201ENST00000344722 OR6C1Q96RD1 312 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 ANGPTL4Q9BY76 406 aa16.12■□□□□ 0.17
SMC4-201ENST00000344722 DHHO43323 396 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 HYAL3O43820 417 aaPredicted RBP16.11■□□□□ 0.17
SMC4-201ENST00000344722 GRPP07492 148 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 HAAOP46952 286 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 DYNLT3P51808 116 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 OR10C1Q96KK4 312 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 HRASP01112 189 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 KRASP01116 189 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 FOXO1Q12778 655 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 PABPC1L2AQ5JQF8 200 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 LSRQ86X29 649 aaPredicted RBP16.11■□□□□ 0.17
SMC4-201ENST00000344722 TOX2Q96NM4 488 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 PECRQ9BY49 303 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 VAX2Q9UIW0 290 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 CD207Q9UJ71 328 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 DSPPQ9NZW4 1301 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 FOCADQ5VW36 1801 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 PRKNO60260 465 aaPredicted RBP16.11■□□□□ 0.17
SMC4-201ENST00000344722 EDDM3BP56851 147 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 BPIFB3P59826 476 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 CDKN3Q16667 212 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 C6orf201Q7Z4U5 140 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 MVB12AQ96EY5 273 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 DHRS3O75911 302 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 CRISP2P16562 243 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 PPP2CBP62714 309 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 PPP2CAP67775 309 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 MYPOPQ86VE0 399 aaPredicted RBP16.11■□□□□ 0.17
SMC4-201ENST00000344722 CISD2Q8N5K1 135 aaKnown RBP16.11■□□□□ 0.17
SMC4-201ENST00000344722 NAT6Q93015 286 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 PRR13Q9NZ81 148 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 HDGFL3Q9Y3E1 203 aa16.11■□□□□ 0.17
SMC4-201ENST00000344722 SIGLEC5O15389 551 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 CSRP3P50461 194 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 AGFG1P52594 562 aaKnown RBP16.1■□□□□ 0.17
SMC4-201ENST00000344722 SIGLEC14Q08ET2 396 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 EDDM3AQ14507 147 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 ZIC1Q15915 447 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 EXT1Q16394 746 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 CLDN23Q96B33 292 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 CT45A10P0DMU9 189 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 DDTP30046 118 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 CDAP32320 146 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 CCDC74BQ96LY2 380 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 FAAP24Q9BTP7 215 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 IL21Q9HBE4 155 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 GOLT1BQ9Y3E0 138 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 LIMS1P48059 325 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 FGF8P55075 233 aaPredicted RBP16.1■□□□□ 0.17
SMC4-201ENST00000344722 ATP6V1FQ16864 119 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 STUMQ69YW2 141 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 TRAV8-7A0A075B6U6 113 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 BCAT2O15382 392 aaPredicted RBP16.1■□□□□ 0.17
SMC4-201ENST00000344722 HEXAP06865 529 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 TMIGD3P0DMS9 266 aaPredicted RBP16.1■□□□□ 0.17
SMC4-201ENST00000344722 FAM3AP98173 230 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 CNEP1R1Q8N9A8 125 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 FGF14Q92915 247 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 TRIB1Q96RU8 372 aa16.1■□□□□ 0.17
SMC4-201ENST00000344722 ZNF117Q03924 483 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 Q5BKY6 102 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 DHRS7BQ6IAN0 325 aaPredicted RBP16.09■□□□□ 0.17
SMC4-201ENST00000344722 ALG14Q96F25 216 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 FOXF1Q12946 379 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 LIAT1Q6ZQX7 453 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 OR4C3Q8NH37 302 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 APH1AQ96BI3 265 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 C6orf106Q9H6K1 298 aaPredicted RBP16.09■□□□□ 0.17
SMC4-201ENST00000344722 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.09■□□□□ 0.17
SMC4-201ENST00000344722 NTN1O95631 604 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 GAPDHP04406 335 aaKnown RBP16.09■□□□□ 0.17
SMC4-201ENST00000344722 GGTLC2Q14390 218 aa16.09■□□□□ 0.17
SMC4-201ENST00000344722 COX19Q49B96 90 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms