RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 OR2F2O95006 317 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 CELA3AP09093 270 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 GFRA1P56159 465 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 EIF3IQ13347 325 aaKnown RBP16.85■□□□□ 0.29
COL9A3-201ENST00000343916 OR2F1Q13607 317 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 TAF9Q16594 264 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 LHFPL1Q86WI0 220 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 C10orf35Q96D05 121 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 SIGLEC12Q96PQ1 595 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 STRADBQ9C0K7 418 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 CHMP1AQ9HD42 196 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-201ENST00000343916 OR6C6A6NF89 314 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 CEACAM18A8MTB9 384 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 SERPINE3A8MV23 424 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 CRHP06850 196 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 IL32P24001 234 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 FPR2P25090 351 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 ACOT7LQ6ZUV0 252 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 SKA3Q8IX90 412 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 TMEM185AQ8NFB2 350 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 OR5AP2Q8NGF4 316 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 OSGIN2Q9Y236 505 aa16.85■□□□□ 0.29
COL9A3-201ENST00000343916 SERPINA5P05154 406 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 UBA52P62987 128 aaKnown RBP16.84■□□□□ 0.29
COL9A3-201ENST00000343916 ANKRD55Q3KP44 614 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 CHRFAM7AQ494W8 412 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 ELP2Q6IA86 826 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 PEG10Q86TG7 708 aaKnown RBP16.84■□□□□ 0.29
COL9A3-201ENST00000343916 SULF2Q8IWU5 870 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 Q96M66 194 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 OR2H1Q9GZK4 316 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 WNT5BQ9H1J7 359 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 CSAG2Q9Y5P2 127 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 DNAJC13O75165 2243 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 ZNF407Q9C0G0 2248 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 DHRS7CA6NNS2 312 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 MSTNO14793 375 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 BCL2L11O43521 198 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 SFT2D2O95562 160 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 TAS2R46P59540 309 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 DEFA5Q01523 94 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 C9orf135Q5VTT2 229 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 TMEM17Q86X19 198 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 EIF4E3Q8N5X7 224 aaKnown RBP16.84■□□□□ 0.29
COL9A3-201ENST00000343916 BHLHE23Q8NDY6 225 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 CDC6Q99741 560 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 SPRY4Q9C004 299 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 GPR35Q9HC97 309 aa16.84■□□□□ 0.29
COL9A3-201ENST00000343916 FIGNL2A6NMB9 653 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 M0R296 226 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 KNG1P01042 644 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 CSTBP04080 98 aaKnown RBP16.83■□□□□ 0.28
COL9A3-201ENST00000343916 CNR1P21554 472 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 PSMB6P28072 239 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 RSU1Q15404 277 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 BRICD5Q6PL45 260 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 UNQ6126/PRO20091Q6UXV3 157 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 BOLLQ8N9W6 283 aaKnown RBP16.83■□□□□ 0.28
COL9A3-201ENST00000343916 FAAP24Q9BTP7 215 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 TIMM10BQ9Y5J6 103 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 FAM186AA6NE01 2351 aa16.83■□□□□ 0.28
COL9A3-201ENST00000343916 NEURL1O76050 574 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 PGAM2P15259 253 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 RRADP55042 308 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 ZNF92Q03936 586 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 INO80EQ8NBZ0 244 aaPredicted RBP16.82■□□□□ 0.28
COL9A3-201ENST00000343916 CPNE4Q96A23 557 aaPredicted RBP16.82■□□□□ 0.28
COL9A3-201ENST00000343916 MED13Q9UHV7 2174 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 FAM74A7A6NL05 159 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 DNASE2O00115 360 aaPredicted RBP16.82■□□□□ 0.28
COL9A3-201ENST00000343916 CYTIPO60759 359 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 ZNF205O95201 554 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 FAM74A3Q4VXF1 159 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 TSPO2Q5TGU0 170 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 CDCP2Q5VXM1 449 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 DYRK2Q92630 601 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 SPSB1Q96BD6 273 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 LRRC46Q96FV0 321 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 METTL9Q9H1A3 318 aa16.82■□□□□ 0.28
COL9A3-201ENST00000343916 NRASP01111 189 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 RPUSD3Q6P087 351 aaKnown RBP16.81■□□□□ 0.28
COL9A3-201ENST00000343916 ZSCAN4Q8NAM6 433 aaPredicted RBP16.81■□□□□ 0.28
COL9A3-201ENST00000343916 DCUN1D4Q92564 292 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 EMG1Q92979 244 aaKnown RBP16.81■□□□□ 0.28
COL9A3-201ENST00000343916 MARC2Q969Z3 335 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 BORCS8Q96FH0 119 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 ZPBPQ9BS86 351 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 SLC25A32Q9H2D1 315 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 TAS2R3Q9NYW6 316 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 URB1O60287 2271 aaKnown RBP16.81■□□□□ 0.28
COL9A3-201ENST00000343916 ZNF587BE7ETH6 402 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 F5H0A9 414 aaPredicted RBP16.81■□□□□ 0.28
COL9A3-201ENST00000343916 H0YIZ8 118 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 RBP2P50120 134 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 RNF126Q9BV68 326 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 RASL12Q9NYN1 266 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 PLA2G3Q9NZ20 509 aa16.81■□□□□ 0.28
COL9A3-201ENST00000343916 BOKQ9UMX3 212 aaPredicted RBP16.81■□□□□ 0.28
COL9A3-201ENST00000343916 IGKV1-12A0A0C4DH73 117 aa16.8■□□□□ 0.28
COL9A3-201ENST00000343916 IGKV1D-12P01611 117 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms