RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 AKR1C3P42330 323 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 MICBQ29980 383 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 OR2B11Q5JQS5 317 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 UQCC3Q6UW78 93 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 SLC25A42Q86VD7 318 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 OR2Y1Q8NGV0 311 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 UBALD1Q8TB05 177 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 RPS4Y2Q8TD47 263 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 LHX4Q969G2 390 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 TMPRSS13Q9BYE2 586 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 NIT2Q9NQR4 276 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 OCIAD1Q9NX40 245 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 SH3BGRL2Q9UJC5 107 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 GPR31O00270 319 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 PPP1R2P9O14990 202 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 KITLGP21583 273 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 TNFSF4P23510 183 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 GSK3AP49840 483 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 TRA2AQ13595 282 aaKnown RBP eCLIP6.36□□□□□ -1.39
VCAN-202ENST00000342785 ADIRFQ15847 76 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 FAM185AQ8N0U4 392 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 BVESQ8NE79 360 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 OR10D3Q8NH80 312 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 TMEM68Q96MH6 324 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 FAM234AQ9H0X4 552 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 ZNF391Q9UJN7 358 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 PRELID3BQ9Y3B1 194 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 ACACAQ13085 2346 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 IGLV1-36A0A0B4J1U3 117 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 EPOPA6NHQ4 379 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 TSPAN2O60636 221 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 MT-ND4LP03901 98 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 SRD5A2P31213 254 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 RAB5CP51148 216 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 PPIAP62937 165 aaKnown RBP6.36□□□□□ -1.39
VCAN-202ENST00000342785 INPP5JQ15735 1006 aaPredicted RBP6.36□□□□□ -1.39
VCAN-202ENST00000342785 ZFP62Q8NB50 900 aaPredicted RBP6.36□□□□□ -1.39
VCAN-202ENST00000342785 OR1J1Q8NGS3 322 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 IP6K3Q96PC2 410 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 PLA2G3Q9NZ20 509 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 ANXA10Q9UJ72 324 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 AKAP6Q13023 2319 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 C17orf51A8MQB3 221 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 NMBP08949 121 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 ZNF362Q5T0B9 420 aaPredicted RBP6.36□□□□□ -1.39
VCAN-202ENST00000342785 ZNF485Q8NCK3 441 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 ADPRHL1Q8NDY3 354 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 UCN2Q96RP3 112 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 PPP1R3CQ9UQK1 317 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 CREBBPQ92793 2442 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 CXCL2P19875 107 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 MNX1P50219 401 aaPredicted RBP6.36□□□□□ -1.39
VCAN-202ENST00000342785 FABP6P51161 128 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 NDUFA6P56556 154 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 IGLV3-21P80748 117 aaPredicted RBP6.36□□□□□ -1.39
VCAN-202ENST00000342785 CLPPQ16740 277 aaPredicted RBP6.36□□□□□ -1.39
VCAN-202ENST00000342785 Q5BKY6 102 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 C1QTNF12Q5T7M4 302 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 IL34Q6ZMJ4 242 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 TMEM104Q8NE00 496 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 RXFP4Q8TDU9 374 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 MFRPQ9BY79 579 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 ARV1Q9H2C2 271 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 GNG13Q9P2W3 67 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 FBXL17Q9UF56 701 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 A0A0B4J293 547 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 AQP7P3A6NL99 342 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 A8MXE2 369 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF205O95201 554 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 PNLIPP16233 465 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 SURF2Q15527 256 aaPredicted RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 SPATA46Q5T0L3 261 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF808Q8N4W9 903 aaPredicted RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 OR8U1Q8NH10 309 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 FSCN3Q9NQT6 498 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 GFOD1Q9NXC2 390 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 NDRG3Q9UGV2 375 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 LCTP09848 1927 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 CACNA1DQ01668 2161 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 A0A0G2JK05 382 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF705GA8MUZ8 300 aaPredicted RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 NPIPB9F8W1W9 429 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ADAM11O75078 769 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ASCL1P50553 236 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 GPM6AP51674 278 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 NR2C2APQ86WQ0 139 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 WDSUB1Q8N9V3 476 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ABHD5Q8WTS1 349 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 AKR1E2Q96JD6 320 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 MRPL22Q9NWU5 206 aaKnown RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 TMED3Q9Y3Q3 217 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 RBBP6Q7Z6E9 1792 aaKnown RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 CCL3P10147 92 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 LIMK1P53667 647 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 OR8G1Q15617 311 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF239Q16600 458 aaKnown RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 OR6S1Q8NH40 331 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 OR4A16Q8NH70 328 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 C22orf15Q8WYQ4 148 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 PTX4Q96A99 478 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms