RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 SERPINE3A8MV23 424 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 RGS13O14921 159 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 HLA-HP01893 362 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 HPXP02790 462 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 IFNA6P05013 189 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 HOXD4P09016 255 aaPredicted RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 ANXA7P20073 488 aaKnown RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 SERPINA2P20848 420 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 GNLYP22749 145 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 APLNRP35414 380 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 KIR2DL2P43627 348 aaPredicted RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 RAB1AP62820 205 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 TGFBR3Q03167 851 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 ZNF92Q03936 586 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 ARFRP1Q13795 201 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 RSU1Q15404 277 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 GALNT11Q8NCW6 608 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 CSNK2A3Q8NEV1 391 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 NUDCD2Q8WVJ2 157 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 SEC22CQ9BRL7 303 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 ZNF436Q9C0F3 470 aaPredicted RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 C12orf49Q9H741 205 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 B3GNT2Q9NY97 397 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 ANAPC10Q9UM13 185 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 A0A0A6YYD4 124 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 TRGV8A0A0C4DH27 118 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 FAM230AA0A1W2PPH8 454 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 TMEM82A0PJX8 343 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 C5orf49A4QMS7 147 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 WIPF3A6NGB9 483 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 M0QYG6 137 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 MFNGO00587 321 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 SOCS1O15524 211 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 FABP7O15540 132 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 TNFSF13O75888 250 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 NAT1P18440 290 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 TIMP3P35625 211 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 ZP1P60852 638 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 SF3B4Q15427 424 aaKnown RBP eCLIP13.12□□□□□ -0.311e-13■■□□□ 11.7
TUBB4B-201ENST00000340384 NDUFA5Q16718 116 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 SLC36A1Q7Z2H8 476 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 MRPL21Q7Z2W9 205 aaKnown RBP13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 RNF144BQ7Z419 303 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 ASB13Q8WXK3 278 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 MRPS24Q96EL2 167 aaKnown RBP13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 POM121Q96HA1 1249 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 TINAGL1Q9GZM7 467 aaPredicted RBP13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 EIF3KQ9UBQ5 218 aaKnown RBP13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 PRSS50Q9UI38 385 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 MEMO1Q9Y316 297 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 NPTNQ9Y639 398 aa13.12□□□□□ -0.31
TUBB4B-201ENST00000340384 CNOT4O95628 575 aaKnown RBP13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 CCNOP22674 350 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 GK2Q14410 553 aaPredicted RBP13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 PLAC9Q5JTB6 97 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 OR2A2Q6IF42 318 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 MOB3CQ70IA8 216 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 ZDHHC22Q8N966 263 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 ASCC1Q8N9N2 400 aaKnown RBP13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 PXT1Q8NFP0 134 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 OR5L1Q8NGL2 311 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 BCL2L2Q92843 193 aaPredicted RBP13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 VKORC1Q9BQB6 163 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 OCSTAMPQ9BR26 566 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 GON7Q9BXV9 100 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 IL36GQ9NZH8 169 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 MGAT4CQ9UBM8 478 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 ELF5Q9UKW6 265 aaPredicted RBP13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 DOCK7Q96N67 2140 aa13.11□□□□□ -0.31
TUBB4B-201ENST00000340384 LOC100509620A0A075B734 347 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 A0A0G2JNJ9 132 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 J3QW42 95 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 SSX5O60225 188 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 GIPP09681 153 aaPredicted RBP13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 ZNF735P0CB33 412 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 CXCL3P19876 107 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 BLVRBP30043 206 aaPredicted RBP13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 SCGB2B2Q4G0G5 96 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 VWA1Q6PCB0 445 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 CRIP3Q6Q6R5 217 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 ASCL4Q6XD76 172 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 OR4K15Q8NH41 348 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 PIGCQ92535 297 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 ARHGAP5-AS1Q96IT6 56 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 POM121L2Q96KW2 1035 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 TMEM246Q9BRR3 403 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 REPIN1Q9BWE0 567 aaKnown RBP13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 Q9UFV3 132 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 KCNK7Q9Y2U2 307 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 A0A1W2PP11 408 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 FOXI3A8MTJ6 420 aaPredicted RBP13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 AKR7A2O43488 359 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 HTR3BO95264 441 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 CGAP01215 116 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 FCER2P06734 321 aa13.1□□□□□ -0.31
TUBB4B-201ENST00000340384 VSIG10L2P0DP72 767 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms