RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 FAM169BQ8N8A8 192 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 MINDY2Q8NBR6 621 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 STEAP2Q8NFT2 490 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 OR51T1Q8NGJ9 327 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 OR10R2Q8NGX6 335 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 OR51F2Q8NH61 342 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 NUDCD2Q8WVJ2 157 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 OR5P3Q8WZ94 311 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 AQP3Q92482 292 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 SLAMF9Q96A28 289 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 SEH1LQ96EE3 360 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ZNF488Q96MN9 340 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 S100A13Q99584 98 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 CST11Q9H112 138 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 OPA3Q9H6K4 179 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 FAIMQ9NVQ4 179 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 RBFOX1Q9NWB1 397 aaKnown RBP3.54□□□□□ -1.84
MCF2-201ENST00000338585 RBMX2Q9Y388 322 aaKnown RBP3.54□□□□□ -1.84
MCF2-201ENST00000338585 CACNG2Q9Y698 323 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 DIDO1Q9BTC0 2240 aaKnown RBP3.54□□□□□ -1.84
MCF2-201ENST00000338585 FUOMA2VDF0 154 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 NKX2-6A6NCS4 301 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 FAM90A27PA6NNH2 459 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 FOXI3A8MTJ6 420 aaPredicted RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 IQCF6A8MYZ5 107 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 H7C417 338 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 SYNGR1O43759 233 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 SSX5O60225 188 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 RHBDL1O75783 438 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 SFTPCP11686 197 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 GABRR1P24046 479 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 GRNP28799 593 aaKnown RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 RAD52P43351 418 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 CCR6P51684 374 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 SNU13P55769 128 aaKnown RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 RAB25P57735 213 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 ADORA2A-AS1P86434 159 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 PRR20EP86478 221 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 PRR20CP86479 221 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 PRR20DP86480 221 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 PRR20BP86481 221 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 PRR20AP86496 221 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 HOXA4Q00056 320 aaPredicted RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 SNTB2Q13425 540 aaKnown RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 DAZAP2Q15038 168 aaPredicted RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 TAF9Q16594 264 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 PCGF3Q3KNV8 242 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 TMEM211Q6ICI0 200 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 HAGHLQ6PII5 290 aaPredicted RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 BRICD5Q6PL45 260 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 VHLLQ6RSH7 139 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 ASCL4Q6XD76 172 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 Q6ZR03 302 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 CADM3Q8N126 398 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 FBXL14Q8N1E6 418 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 FTMTQ8N4E7 242 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 FAM89BQ8N5H3 189 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 GVQW1Q8N7I0 195 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 OR10AD1Q8NGE0 317 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 OR4D10Q8NGI6 311 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 ENKURQ8TC29 256 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 GPX8Q8TED1 209 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 GTF3AQ92664 365 aaKnown RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 UPRTQ96BW1 309 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 RAB3CQ96E17 227 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 ARHGAP5-AS1Q96IT6 56 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 Q96M66 194 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 TECTBQ96PL2 329 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 METTL9Q9H1A3 318 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 MSL2Q9HCI7 577 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 HRASLSQ9HDD0 168 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 ELOVL5Q9NYP7 299 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 IL36RNQ9UBH0 155 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 GHRLQ9UBU3 117 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 MTFP1Q9UDX5 166 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 PURGQ9UJV8 347 aaKnown RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 POU2F3Q9UKI9 436 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 CACNA1BQ00975 2339 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 A0A0A6YYH2 397 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 A0A0B4J293 547 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 FAM240BA0A1B0GVZ2 78 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 ANKRD20A5PA0PJZ0 165 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 A6NJ64 397 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 MFNGO00587 321 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 MLNRO43193 412 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 RBBP9O75884 186 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 TPPPO94811 219 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 CRYAAP02489 173 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 CSTBP04080 98 aaKnown RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 LPLP06858 475 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 HIST1H1DP16402 221 aaKnown RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 BCL3P20749 454 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 CD40P25942 277 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 GIFP27352 417 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 BLVRBP30043 206 aaPredicted RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 SLC6A1P30531 599 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 UQCRFS1P47985 274 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 BCAP31P51572 246 aa3.53□□□□□ -1.84
MCF2-201ENST00000338585 NKX6-1P78426 367 aaPredicted RBP3.53□□□□□ -1.84
MCF2-201ENST00000338585 MRPS10P82664 201 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms