RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SMAD7O15105 426 aaKnown RBP10□□□□□ -0.81
SPTLC1-202ENST00000337841 PIN1P1O15428 100 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 AKR7A2O43488 359 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 NOS1APO75052 506 aaPredicted RBP10□□□□□ -0.81
SPTLC1-202ENST00000337841 RHBDL1O75783 438 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 ZNF205O95201 554 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 IGHV2-70P01814 119 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 TMEM225BP0DP42 221 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 FOSL1P15407 271 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 MUC1P15941 1255 aaPredicted RBP10□□□□□ -0.81
SPTLC1-202ENST00000337841 IGFBP3P17936 291 aaPredicted RBP10□□□□□ -0.81
SPTLC1-202ENST00000337841 SRMP19623 302 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 GALP22466 123 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 GLRA1P23415 457 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 MPZP25189 248 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 PDZK1IP1Q13113 114 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 ZMYND11Q15326 602 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 KISS1Q15726 138 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 SSX1Q16384 188 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 FAM201AQ5SY85 155 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 SFRP4Q6FHJ7 346 aaPredicted RBP10□□□□□ -0.81
SPTLC1-202ENST00000337841 SLC25A26Q70HW3 274 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 CALHM1Q8IU99 346 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 CDH26Q8IXH8 852 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 ZSCAN4Q8NAM6 433 aaPredicted RBP10□□□□□ -0.81
SPTLC1-202ENST00000337841 POC1AQ8NBT0 407 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 OR51F2Q8NH61 342 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 TMIGD2Q96BF3 282 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 C18orf12Q96KH6 178 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 NARFLQ9H6Q4 476 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 NDUFB11Q9NX14 153 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 DNAJB11Q9UBS4 358 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 MIOXQ9UGB7 285 aa10□□□□□ -0.81
SPTLC1-202ENST00000337841 IGKV1-27A0A075B6S5 117 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 TRDV1A0A1B0GX56 115 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 TRIM64CA6NLI5 447 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 SRRM5B3KS81 715 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 TRAPPC2LH3BP13 241 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 GABRPO00591 440 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 SYNGR1O43759 233 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 SC5DO75845 299 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 NXPH2O95156 264 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 PLATP00750 562 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 MAS1P04201 325 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 UCHL1P09936 223 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 JUNBP17275 347 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 FSTP19883 344 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 CD80P33681 288 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 ZNF93P35789 620 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 POU3F4P49335 361 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 GMFBP60983 142 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 FABP5Q01469 135 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 INSL4Q14641 139 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 DDI2Q5TDH0 399 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 TEX36Q5VZQ5 186 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 TMEM91Q6ZNR0 172 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 Q8IYB0 196 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 SAXO1Q8IYX7 474 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 PNLDC1Q8NA58 520 aaKnown RBP9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 OR52N4Q8NGI2 321 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 OR51A2Q8NGJ7 313 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 CLDND2Q8NHS1 167 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 MUL1Q969V5 352 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 RFT1Q96AA3 541 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 C12orf43Q96C57 262 aaKnown RBP9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 FOXRED1Q96CU9 486 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 ORAI1Q96D31 301 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 RAB39BQ96DA2 213 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 CEP19Q96LK0 163 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 SPACA5Q96QH8 159 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 S100A13Q99584 98 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 TMEM246Q9BRR3 403 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 PCDHB16Q9NRJ7 776 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 SNTG1Q9NSN8 517 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 SSR3Q9UNL2 185 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 GSTK1Q9Y2Q3 226 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 CREBBPQ92793 2442 aa9.99□□□□□ -0.81
SPTLC1-202ENST00000337841 TRAV8-7A0A075B6U6 113 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 WNT9BO14905 357 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 INHBBP09529 407 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 PGA5P0DJD9 388 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 CD36P16671 472 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 EGR1P18146 543 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 RBMXP38159 391 aaKnown RBP9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 RANBP1P43487 201 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 GZMKP49863 264 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 PSMD7P51665 324 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 GP2P55259 537 aaKnown RBP9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 LMO4P61968 165 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 HNRNPA0Q13151 305 aaKnown RBP9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 ZNF404Q494X3 552 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 GLT8D1Q68CQ7 371 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 ASPHD2Q6ICH7 369 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 CD200R1LQ6Q8B3 271 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 DCDC5Q6ZRR9 648 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 NLRC3Q7RTR2 1065 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 FAM90A1Q86YD7 464 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 CIARTQ8N365 385 aaPredicted RBP9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 MAPK1IP1LQ8NDC0 245 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 C19orf18Q8NEA5 215 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms