RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PIK3IP1Q96FE7 263 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 REEP6Q96HR9 211 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 ESRP2Q9H6T0 727 aaKnown RBP13.54□□□□□ -0.24
VARS2-201ENST00000321897 VSIG4Q9Y279 399 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 FLVCR1Q9Y5Y0 555 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 WNK2Q9Y3S1 2297 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 CDRT15L2A8MXV6 281 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 DDAH2O95865 285 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 ABHD16AO95870 558 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 GSK3AP49840 483 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 DVL1P1P54792 670 aaPredicted RBP13.54□□□□□ -0.24
VARS2-201ENST00000321897 TAS2R46P59540 309 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 SLC35A1P78382 337 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 SRSF3P84103 164 aaKnown RBP13.54□□□□□ -0.24
VARS2-201ENST00000321897 EMC4Q5J8M3 183 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 PLPP3O14495 311 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 HLA-HP01893 362 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 ZNF728P0DKX0 622 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 SULT1A1P50225 295 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 ZNF610Q8N9Z0 462 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 SNIP1Q8TAD8 396 aaKnown RBP13.54□□□□□ -0.24
VARS2-201ENST00000321897 UCN2Q96RP3 112 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 STRADBQ9C0K7 418 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 OR2M5A3KFT3 312 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 OR2A4O95047 310 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 ELLP55199 621 aaPredicted RBP13.53□□□□□ -0.24
VARS2-201ENST00000321897 OR8U1Q8NH10 309 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 CPNE4Q96A23 557 aaPredicted RBP13.53□□□□□ -0.24
VARS2-201ENST00000321897 OR2A7Q96R45 310 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 LANCL2Q9NS86 450 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 KIAA2026Q5HYC2 2103 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 A0A1W2PR80 420 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 ZNF727A8MUV8 499 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 MSTNO14793 375 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 TMEM33P57088 247 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 JMJD6Q6NYC1 403 aaPredicted RBP13.53□□□□□ -0.24
VARS2-201ENST00000321897 GJC3Q8NFK1 279 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 OR13C8Q8NGS7 320 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 RNF128Q8TEB7 428 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 RDH5Q92781 318 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 CABLES2Q9BTV7 478 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 RTN4RQ9BZR6 473 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 PLA2G3Q9NZ20 509 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 HS3ST1O14792 307 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 MBP02144 154 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 ACAA1P09110 424 aaPredicted RBP13.53□□□□□ -0.24
VARS2-201ENST00000321897 MMP7P09237 267 aaPredicted RBP13.53□□□□□ -0.24
VARS2-201ENST00000321897 NXPH1P58417 271 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 MOGAT2Q3SYC2 334 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 SPATA46Q5T0L3 261 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 FHL5Q5TD97 284 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 ZNF709Q8N972 641 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 LIPHQ8WWY8 451 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 PLPPR2Q96GM1 343 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 MYOTQ9UBF9 498 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 WASF3Q9UPY6 502 aa13.53□□□□□ -0.24
VARS2-201ENST00000321897 CHD7Q9P2D1 2997 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 SMIM10L1P0DMW3 83 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 MALLQ13021 153 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 FZD5Q13467 585 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.52□□□□□ -0.24
VARS2-201ENST00000321897 C6orf201Q7Z4U5 140 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 CMTM1Q8IZ96 169 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 SMIM10Q96HG1 83 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 ZCCHC4Q9H5U6 513 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 HAO2Q9NYQ3 351 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 OR5AC2Q9NZP5 309 aa13.52□□□□□ -0.24
VARS2-201ENST00000321897 IGKV1D-42A0A075B6H8 117 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 SOCS1O15524 211 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 ST8SIA3O43173 380 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 MPGP29372 298 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 KIR3DL2P43630 455 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 IL10RAQ13651 578 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 ZNF528Q3MIS6 628 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 ZNF658BQ4V348 819 aaPredicted RBP13.52□□□□□ -0.25
VARS2-201ENST00000321897 TSPO2Q5TGU0 170 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 C15orf54Q8N8G6 183 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 OR51H1Q8NH63 302 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 MVB12AQ96EY5 273 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 RRNAD1Q96FB5 475 aaKnown RBP13.52□□□□□ -0.25
VARS2-201ENST00000321897 IP6K3Q96PC2 410 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 MFRPQ9BY79 579 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 NOSIPQ9Y314 301 aaKnown RBP13.52□□□□□ -0.25
VARS2-201ENST00000321897 CXorf65A6NEN9 183 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 NUDT19A8MXV4 375 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 HPNP05981 417 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 SERPINE2P07093 398 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 SLC25A1P53007 311 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 VHLLQ6RSH7 139 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 ASB5Q8WWX0 329 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 TMEM37Q8WXS4 190 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 RPUSD4Q96CM3 377 aaKnown RBP13.52□□□□□ -0.25
VARS2-201ENST00000321897 SPACA9Q96E40 222 aaPredicted RBP13.52□□□□□ -0.25
VARS2-201ENST00000321897 MALSU1Q96EH3 234 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 SNX22Q96L94 193 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 B4GALT7Q9UBV7 327 aa13.52□□□□□ -0.25
VARS2-201ENST00000321897 A0A1W2PPQ1 181 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 C1orf87Q8N0U7 546 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 NKAIN3Q8N8D7 197 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 CLEC1AQ8NC01 280 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms