RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SLC22A4Q9H015 551 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 MS4A5Q9H3V2 200 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 BANF2Q9H503 90 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 CYSLTR2Q9NS75 346 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 C1orf123Q9NWV4 160 aa13.04□□□□□ -0.32
PDLIM5-202ENST00000318007 IGKV1-12A0A0C4DH73 117 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 MEGF11A6BM72 1044 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 OR5B21A6NL26 309 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 IGKV1D-12P01611 117 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 ARSBP15848 533 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 TNFSF4P23510 183 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 PDCD1Q15116 288 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 FAM201AQ5SY85 155 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 OR5H6Q8NGV6 325 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 CCL17Q92583 94 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 TECTBQ96PL2 329 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 CCL19Q99731 98 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 TRAF4Q9BUZ4 470 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 SLIRPQ9GZT3 109 aaKnown RBP13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 OR51I2Q9H344 312 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 SMURF1Q9HCE7 757 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 RBFOX1Q9NWB1 397 aaKnown RBP13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 C14orf119Q9NWQ9 140 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 IL36RNQ9UBH0 155 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 STEAP1Q9UHE8 339 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 ZDHHC8Q9ULC8 765 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 SLC17A2O00624 439 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 WNT9BO14905 357 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 CYB5R3P00387 301 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 SFTPBP07988 381 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 EVX1P49640 407 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 ZP1P60852 638 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 PDZK1IP1Q13113 114 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 C11orf71Q6IPW1 123 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 ZNF573Q86YE8 665 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 WDR13Q9H1Z4 485 aa13.03□□□□□ -0.32
PDLIM5-202ENST00000318007 SVEP1Q4LDE5 3571 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 LRP5LA4QPB2 252 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 CRTAPO75718 401 aaPredicted RBP13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 TFF1P04155 84 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 BCL3P20749 454 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 BMXP51813 675 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 RSU1Q15404 277 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 CARTPTQ16568 116 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 DGUOKQ16854 277 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 LYPD6Q86Y78 171 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 TMEM104Q8NE00 496 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 OR6M1Q8NGM8 313 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 MCFD2Q8NI22 146 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 FAM3DQ96BQ1 224 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 CYYR1Q96J86 154 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 GCM1Q9NP62 436 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 MTCH1Q9NZJ7 389 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 IL19Q9UHD0 177 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 PPP1R3CQ9UQK1 317 aa13.02□□□□□ -0.32
PDLIM5-202ENST00000318007 RAI1Q7Z5J4 1906 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-202ENST00000318007 CTDSP2O14595 271 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 HTR3BO95264 441 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 ALDOBP05062 364 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 DUSP1P28562 367 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 SRP9P49458 86 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 EFNB2P52799 333 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 C2orf76Q3KRA6 126 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 DTX2Q86UW9 622 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 C11orf53Q8IXP5 236 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 AQP3Q92482 292 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 ITFG2Q969R8 447 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 OR5V1Q9UGF6 321 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 PLEKHA6Q9Y2H5 1048 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 HPGDSO60760 199 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 ALX3O95076 343 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 PMELP40967 661 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 PSMD7P51665 324 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 ZNF404Q494X3 552 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 WDR82Q6UXN9 313 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 LAX1Q8IWV1 398 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 SAMD12Q8N8I0 201 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 OR5T2Q8NGG2 359 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 LRRC29Q8WV35 223 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 SLC25A28Q96A46 364 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 FOXRED1Q96CU9 486 aaPredicted RBP13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 UQCC2Q9BRT2 126 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 ZNF581Q9P0T4 197 aa13.01□□□□□ -0.33
PDLIM5-202ENST00000318007 IGHV3OR15-7A0A075B7D8 119 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 TMEM272A0A1B0GTI8 110 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 MPIG6BO95866 241 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 CYB5AP00167 134 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 VSIG8P0DPA2 414 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 BMP4P12644 408 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 CD200P41217 278 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 PIGYQ3MUY2 71 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 KRT74Q7RTS7 529 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 SPERTQ8NA61 448 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 CPNE2Q96FN4 548 aaPredicted RBP13□□□□□ -0.33
PDLIM5-202ENST00000318007 CCDC59Q9P031 241 aaKnown RBP13□□□□□ -0.33
PDLIM5-202ENST00000318007 NOP16Q9Y3C1 178 aaKnown RBP13□□□□□ -0.33
PDLIM5-202ENST00000318007 A0A1B0GWJ7 208 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 TRIM64BA6NI03 449 aa13□□□□□ -0.33
PDLIM5-202ENST00000318007 TMEM210A6NLX4 147 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms