RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 ARL11Q969Q4 196 aa18.2■□□□□ 0.5
RELA-201ENST00000308639 INTS12Q96CB8 462 aaKnown RBP18.2■□□□□ 0.5
RELA-201ENST00000308639 ULBP2Q9BZM5 246 aa18.2■□□□□ 0.5
RELA-201ENST00000308639 PARP12Q9H0J9 701 aaKnown RBP18.2■□□□□ 0.5
RELA-201ENST00000308639 FABP1P07148 127 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 ADH6P28332 368 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 TAS2R46P59540 309 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 RBM39Q14498 530 aaKnown RBP18.19■□□□□ 0.5
RELA-201ENST00000308639 ZNF239Q16600 458 aaKnown RBP18.19■□□□□ 0.5
RELA-201ENST00000308639 HLA-BQ31612 363 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 SP6Q3SY56 376 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 ZNF629Q9UEG4 869 aaPredicted RBP18.19■□□□□ 0.5
RELA-201ENST00000308639 TINAGQ9UJW2 476 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 A0A0G2JMM0 328 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 A0A1W2PPB8 328 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 A0A1W2PRS3 328 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 FIGNL2A6NMB9 653 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 KIR3DP1A8MWS1 328 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 FBXO24O75426 580 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 CTSSP25774 331 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 NPBWR1P48145 328 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 TSC22D1Q15714 1073 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 IAH1Q2TAA2 248 aaPredicted RBP18.19■□□□□ 0.5
RELA-201ENST00000308639 UQCC3Q6UW78 93 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 PLA2G2EQ9NZK7 142 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 DKKL1Q9UK85 242 aa18.19■□□□□ 0.5
RELA-201ENST00000308639 IGKV1-27A0A075B6S5 117 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 IGHV1-45A0A0A0MS14 117 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 SNAPINO95295 136 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 LIFP15018 202 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 MTCP1P56278 107 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 IL15RAQ13261 267 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 H3F3CQ6NXT2 135 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 TOMM40LQ969M1 308 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 AQP10Q96PS8 301 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 LOC102725191A0A1B0GVB3 256 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 FARS2O95363 451 aaKnown RBP18.18■□□□□ 0.5
RELA-201ENST00000308639 ZNF708P17019 499 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 CPT2P23786 658 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 LPAR6P43657 344 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 SWI5Q1ZZU3 235 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 ZNF528Q3MIS6 628 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 C10orf128Q5T292 105 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 TSPO2Q5TGU0 170 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 LYSMD4Q5XG99 296 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 ZNF774Q6NX45 483 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 MRPL24Q96A35 216 aaKnown RBP18.18■□□□□ 0.5
RELA-201ENST00000308639 SHANK1Q9Y566 2161 aa18.18■□□□□ 0.5
RELA-201ENST00000308639 A0A0U1RQV5 110 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 SCGB1D2O95969 90 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 COX6A1P12074 109 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 LYL1P12980 280 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 NAAAQ02083 359 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 YRDCQ86U90 279 aaKnown RBP18.17■□□□□ 0.5
RELA-201ENST00000308639 C14orf166Q9Y224 244 aaKnown RBP18.17■□□□□ 0.5
RELA-201ENST00000308639 HKR1P10072 659 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 NFYBP25208 207 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 RPUSD3Q6P087 351 aaKnown RBP18.17■□□□□ 0.5
RELA-201ENST00000308639 SVBPQ8N300 66 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 AKR7LQ8NHP1 331 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 NANPQ8TBE9 248 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 EMG1Q92979 244 aaKnown RBP18.17■□□□□ 0.5
RELA-201ENST00000308639 ALKBH3Q96Q83 286 aaPredicted RBP18.17■□□□□ 0.5
RELA-201ENST00000308639 DUSP23Q9BVJ7 150 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 TM2D1Q9BX74 207 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 LPAR3Q9UBY5 353 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 LSM5Q9Y4Y9 91 aaKnown RBP18.17■□□□□ 0.5
RELA-201ENST00000308639 PCDHGA1Q9Y5H4 931 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 HS3ST3B1Q9Y662 390 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 NCKAP5O14513 1909 aa18.17■□□□□ 0.5
RELA-201ENST00000308639 IFNA2P01563 188 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 MUC1P15941 1255 aaPredicted RBP18.16■□□□□ 0.5
RELA-201ENST00000308639 HAGHLQ6PII5 290 aaPredicted RBP18.16■□□□□ 0.5
RELA-201ENST00000308639 SLC16A14Q7RTX9 510 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 TMEM156Q8N614 296 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 SCGB3A2Q96PL1 93 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 SERPINE3A8MV23 424 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 S100A6P06703 90 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 OTX1P32242 354 aaPredicted RBP18.16■□□□□ 0.5
RELA-201ENST00000308639 RBMXP38159 391 aaKnown RBP18.16■□□□□ 0.5
RELA-201ENST00000308639 ALDH3B1P43353 468 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 LILRB2Q8N423 598 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 IFI44Q8TCB0 444 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 PP6455Q8WZ26 134 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 BSCL2Q96G97 398 aaPredicted RBP18.16■□□□□ 0.5
RELA-201ENST00000308639 MARS2Q96GW9 593 aaKnown RBP18.16■□□□□ 0.5
RELA-201ENST00000308639 IMMP1LQ96LU5 166 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 Q96M66 194 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 CNTNAP3BQ96NU0 1288 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.16■□□□□ 0.5
RELA-201ENST00000308639 AK3Q9UIJ7 227 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 FOXD3Q9UJU5 478 aaPredicted RBP18.16■□□□□ 0.5
RELA-201ENST00000308639 MED6O75586 246 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 KLF7O75840 302 aaPredicted RBP18.16■□□□□ 0.5
RELA-201ENST00000308639 IFNA4P05014 189 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 B4GALT1P15291 398 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 PIGYQ3MUY2 71 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 SULF2Q8IWU5 870 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 ADAMTS17Q8TE56 1095 aa18.16■□□□□ 0.5
RELA-201ENST00000308639 RHBDD1Q8TEB9 315 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms