RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 IDO2Q6ZQW0 420 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 SLC25A26Q70HW3 274 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 ZNF107Q9UII5 783 aaPredicted RBP12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 PTPRQQ9UMZ3 2332 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 SPTBN4Q9H254 2564 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 PIEZO2Q9H5I5 2752 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 HAAOP46952 286 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 NKX2-5P52952 324 aaPredicted RBP12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 PLAC9Q5JTB6 97 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 OR52W1Q6IF63 320 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 BHLHA15Q7RTS1 189 aaPredicted RBP12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 ZNF611Q8N823 705 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 FAM57AQ8TBR7 257 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 ST6GAL2Q96JF0 529 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 TNFSF13O75888 250 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 ZNF14P17017 642 aaPredicted RBP12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 CBX5P45973 191 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 TMEM50BP56557 158 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 PPP1CBP62140 327 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 MAB21L1Q13394 359 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 GFRALQ6UXV0 394 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 OSR2Q8N2R0 312 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 FYTTD1Q96QD9 318 aaKnown RBP12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 ZNF701Q9NV72 531 aaPredicted RBP12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 ZNF69Q9UC07 566 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 KCNK7Q9Y2U2 307 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 RAXQ9Y2V3 346 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 ZNF732B4DXR9 585 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 CBR1P16152 277 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 ANXA7P20073 488 aaKnown RBP12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 COX5AP20674 150 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 RTL6Q6ICC9 239 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 OR1J1Q8NGS3 322 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 WBP1Q96G27 269 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 ST6GALNAC5Q9BVH7 336 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 POFUT1Q9H488 388 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 SH3BGRL2Q9UJC5 107 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 WASF3Q9UPY6 502 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 UBE2QL1A1L167 161 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 C7orf66A4D0T2 115 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 ICMTO60725 284 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 HOXD4P09016 255 aaPredicted RBP12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 FAM87AP0C7U9 286 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 AMY2BP19961 511 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 CEACAM21Q3KPI0 293 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 OR4K15Q8NH41 348 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 PRRT1Q99946 306 aa12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 ZNF629Q9UEG4 869 aaPredicted RBP12.5□□□□□ -0.41
SHCBP1-201ENST00000303383 WIPF3A6NGB9 483 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 SERPINE3A8MV23 424 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 J3QW42 95 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 CST4P01036 141 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 OR3A3P47888 321 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 TSPAN5P62079 268 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 FCN2Q15485 313 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 CRIP3Q6Q6R5 217 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 TMED4Q7Z7H5 227 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 FBXL14Q8N1E6 418 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 BATF2Q8N1L9 274 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 FAM89BQ8N5H3 189 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 PXT1Q8NFP0 134 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 TM2D1Q9BX74 207 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 PECRQ9BY49 303 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 GHITMQ9H3K2 345 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 MPC1Q9Y5U8 109 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 ZFHX4Q86UP3 3567 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 PYCARD-AS1I3L0S3 204 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 CREBL2O60519 120 aaPredicted RBP12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 HRH1P35367 487 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 C6orf201Q7Z4U5 140 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 C17orf78Q8N4C9 275 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 Q96M66 194 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 OR2J1Q9GZK6 312 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 ST3GAL6Q9Y274 331 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 FAM215AQ9Y5M1 114 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 ZGRF1Q86YA3 2104 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 A0A1B0GUH1 482 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 EEF1E1-BLOC1S5C9J1V9 151 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 MFNGO00587 321 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 RAD52P43351 418 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 SNU13P55769 128 aaKnown RBP12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 CD276Q5ZPR3 534 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 SEM1Q6ZVN7 128 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 RTN4RL2Q86UN3 420 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 RPRMLQ8N4K4 120 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 UXS1Q8NBZ7 420 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 CCDC107Q8WV48 283 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 SLC25A21Q9BQT8 299 aaPredicted RBP12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 SEC22CQ9BRL7 303 aa12.49□□□□□ -0.41
SHCBP1-201ENST00000303383 TRAPPC2LH3BP13 241 aa12.48□□□□□ -0.41
SHCBP1-201ENST00000303383 SMPD2O60906 423 aa12.48□□□□□ -0.41
SHCBP1-201ENST00000303383 PMP2P02689 132 aa12.48□□□□□ -0.41
SHCBP1-201ENST00000303383 CA6P23280 308 aa12.48□□□□□ -0.41
SHCBP1-201ENST00000303383 ST3GAL2Q16842 350 aa12.48□□□□□ -0.41
SHCBP1-201ENST00000303383 MYPOPQ86VE0 399 aaPredicted RBP12.48□□□□□ -0.41
SHCBP1-201ENST00000303383 CALHM1Q8IU99 346 aa12.48□□□□□ -0.41
SHCBP1-201ENST00000303383 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
SHCBP1-201ENST00000303383 OR5A2Q8NGI9 324 aa12.48□□□□□ -0.41
SHCBP1-201ENST00000303383 MRPS24Q96EL2 167 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms