RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CCDC74AQ96AQ1 378 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 MRPL22Q9NWU5 206 aaKnown RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 ASB1Q9Y576 335 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 LINC00862A6NCI5 91 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 TNFSF11O14788 317 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 HRO43593 1189 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 RPS16P62249 146 aaKnown RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 RNASEKQ6P5S7 137 aaKnown RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SLC25A26Q70HW3 274 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 RPS4Y2Q8TD47 263 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SEBOXQ9HB31 216 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 CA10Q9NS85 328 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SOCS7O14512 581 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 OR10G3Q8NGC4 313 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 MS4A4AQ96JQ5 239 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 TINAGL1Q9GZM7 467 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 ESRP2Q9H6T0 727 aaKnown RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SH2D2AQ9NP31 389 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 FAM74A7A6NL05 159 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 FCN1O00602 326 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 CDC14BO60729 498 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 LILRA3Q8N6C8 439 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 OR4F17Q8NGA8 305 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 MAGT1Q9H0U3 335 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 A0A1W2PN81 502 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 PRSS23O95084 383 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 EPHA2P29317 976 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 CHRNA7P36544 502 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 LGALSLQ3ZCW2 172 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 LRRC10Q5BKY1 277 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 OR5D13Q8NGL4 314 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 HES4Q9HCC6 221 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SIRT5Q9NXA8 310 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 DHCR7Q9UBM7 475 aaKnown RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 HSPB8Q9UJY1 196 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 KCNE1BA0A087WTH5 132 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SCO1O75880 301 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 KRASP01116 189 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 RPLP1P05386 114 aaKnown RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 ASCL1P50553 236 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 PAX5Q02548 391 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 ETFDHQ16134 617 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 OR13H1Q8NG92 308 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 ATG101Q9BSB4 218 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM204Q9BSN7 226 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SLC2A8Q9NY64 477 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 ASPDHA6ND91 283 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 PMCHP20382 165 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 PTGFRP43088 359 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 CSNK1EP49674 416 aaKnown RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 C9orf62Q8N4C0 152 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SARAFQ96BY9 339 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 EMC6Q9BV81 110 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SIT1Q9Y3P8 196 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 C3orf85A0A1B0GTC6 90 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 EFSO43281 561 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 HLA-GP17693 338 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 SNRPEP62304 92 aaKnown RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 C20orf196Q8IYI0 205 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 WFDC5Q8TCV5 224 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 RDH5Q92781 318 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 EXTL1Q92935 676 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 TRAF4Q9BUZ4 470 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-201ENST00000302516 EDIL3O43854 480 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 HOXC4P09017 264 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-201ENST00000302516 HTRA3P83110 453 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 SSX1Q16384 188 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 PACRGQ96M98 296 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-201ENST00000302516 KCNK15Q9H427 330 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 TNFRSF12AQ9NP84 129 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 PLEKHB1Q9UF11 243 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-201ENST00000302516 MMP24Q9Y5R2 645 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 ADAM20O43506 726 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 ETHE1O95571 254 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF343Q6P1L6 599 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 ASB16Q96NS5 453 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF835Q9Y2P0 537 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 A0A087X0M5 115 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 A0A1B0GX30 115 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 CTSDP07339 412 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-201ENST00000302516 TNFRSF1AP19438 455 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 HLA-DRB3P79483 266 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 FXNQ16595 210 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 DOLPP1Q86YN1 238 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 OR5AS1Q8N127 324 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 TMPRSS13Q9BYE2 586 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM167BQ9NRX6 74 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 DNAJB12Q9NXW2 375 aaKnown RBP6.84□□□□□ -1.31
SF3B3-201ENST00000302516 SLC22A20A6NK97 555 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 ASTLQ6HA08 431 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-201ENST00000302516 ST6GAL2Q96JF0 529 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 FGF22Q9HCT0 170 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 MMP17Q9ULZ9 603 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 PPIL1Q9Y3C6 166 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 MFNGO00587 321 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 B4GALT1P15291 398 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 FAHP16930 419 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 GNG3P63215 75 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 ADTRPQ96IZ2 230 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 FAAP24Q9BTP7 215 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms