RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 COMMD2Q86X83 199 aa9.56□□□□□ -0.88
ZNF558-201ENST00000301475 ABHD5Q8WTS1 349 aa9.56□□□□□ -0.88
ZNF558-201ENST00000301475 FRZBQ92765 325 aa9.56□□□□□ -0.88
ZNF558-201ENST00000301475 MVB12AQ96EY5 273 aa9.56□□□□□ -0.88
ZNF558-201ENST00000301475 KCNK17Q96T54 332 aa9.56□□□□□ -0.88
ZNF558-201ENST00000301475 C2orf88Q9BSF0 95 aa9.56□□□□□ -0.88
ZNF558-201ENST00000301475 TCEAL2Q9H3H9 227 aaPredicted RBP9.56□□□□□ -0.88
ZNF558-201ENST00000301475 IGKV1-9A0A0C4DH69 117 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 FTCDNL1E5RQL4 147 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 ZNF205O95201 554 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 IFNA10P01566 189 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 CELA2BP08218 269 aaPredicted RBP9.55□□□□□ -0.88
ZNF558-201ENST00000301475 QDPRP09417 244 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 TRGC1P0CF51 173 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 SPCS3P61009 180 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 RND3P61587 244 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 DNLZQ5SXM8 178 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 OR2T2Q6IF00 324 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 CRIP3Q6Q6R5 217 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 OR51T1Q8NGJ9 327 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 RNASE11Q8TAA1 199 aaKnown RBP9.55□□□□□ -0.88
ZNF558-201ENST00000301475 SLC37A2Q8TED4 501 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 GPER1Q99527 375 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 HDHD3Q9BSH5 251 aaPredicted RBP9.55□□□□□ -0.88
ZNF558-201ENST00000301475 MCTS1Q9ULC4 181 aaKnown RBP9.55□□□□□ -0.88
ZNF558-201ENST00000301475 CA14Q9ULX7 337 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 LIPGQ9Y5X9 500 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 SLCO1B1Q9Y6L6 691 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 CNTRLQ7Z7A1 2325 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 LRP4O75096 1905 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 A0A087WWC5 75 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 RBFOX3A6NFN3 312 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 ZNF878C9JN71 531 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 MS4A18H0YCH9 400 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 LINC01565O15544 149 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 SRP19P09132 144 aaKnown RBP9.55□□□□□ -0.88
ZNF558-201ENST00000301475 BLVRBP30043 206 aaPredicted RBP9.55□□□□□ -0.88
ZNF558-201ENST00000301475 MS4A18Q3C1V0 323 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 LYZL2Q7Z4W2 148 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 FAM89BQ8N5H3 189 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 CYB561D1Q8N8Q1 229 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 FAM71F1Q96KD3 344 aaPredicted RBP9.55□□□□□ -0.88
ZNF558-201ENST00000301475 C5orf34Q96MH7 638 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 PECRQ9BY49 303 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 GPR84Q9NQS5 396 aa9.55□□□□□ -0.88
ZNF558-201ENST00000301475 PNO1Q9NRX1 252 aaKnown RBP9.55□□□□□ -0.88
ZNF558-201ENST00000301475 ELOA3CA0A087WX78 387 aaPredicted RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 NPIPA5E9PKD4 350 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 AHSA1O95433 338 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 PTBP3O95758 552 aaKnown RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 CTSDP07339 412 aaPredicted RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 SNRPCP09234 159 aaKnown RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 GLI4P10075 376 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 PGCP20142 388 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 AFF3P51826 1226 aaKnown RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 POLR2HP52434 150 aaKnown RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 RUNX3Q13761 415 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 TSPO2Q5TGU0 170 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 TANGO2Q6ICL3 276 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 DNM1P34Q6PK57 102 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 TGIF2LXQ8IUE1 241 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 OR8B12Q8NGG6 310 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 OR52M1Q8NGK5 317 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 FAM131CQ96AQ9 280 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 MMABQ96EY8 250 aaPredicted RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 PACRGQ96M98 296 aaPredicted RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 NEU1Q99519 415 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 URM1Q9BTM9 101 aaKnown RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 NPIPA1Q9UND3 350 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 KCNIP3Q9Y2W7 256 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 NSG1A0A0A6YYJ2 146 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 C5orf67F2Z3F1 127 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 OR5AC1P0C628 307 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 IL2RGP31785 369 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 POU3F1Q03052 451 aaPredicted RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 TMEM176BQ3YBM2 270 aaPredicted RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 RTL10Q7L3V2 364 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 SSC4DQ8WTU2 575 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 NPRL2Q8WTW4 380 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 OIT3Q8WWZ8 545 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 ADIPOR1Q96A54 375 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 HIST1H2BLQ99880 126 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 EMC6Q9BV81 110 aa9.54□□□□□ -0.88
ZNF558-201ENST00000301475 FOXD3Q9UJU5 478 aaPredicted RBP9.54□□□□□ -0.88
ZNF558-201ENST00000301475 FRG2CA6NGY1 282 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 CCDC85CA6NKD9 419 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 HSD17B7P56937 341 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 PIGPP57054 158 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 C4orf17Q53FE4 359 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 ZNF385CQ66K41 422 aaPredicted RBP9.53□□□□□ -0.88
ZNF558-201ENST00000301475 OOSP2Q86WS3 158 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 ZFP62Q8NB50 900 aaPredicted RBP9.53□□□□□ -0.88
ZNF558-201ENST00000301475 TSLPQ969D9 159 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 LURAP1Q96LR2 239 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 CRLF2Q9HC73 371 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 PADI1Q9ULC6 663 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 NCOA6Q14686 2063 aaPredicted RBP9.53□□□□□ -0.88
ZNF558-201ENST00000301475 ALG1L2C9J202 215 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 IL12BP29460 328 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 TFF2Q03403 129 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms