RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 MPZP25189 248 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 SLC25A47Q6Q0C1 308 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 OR10Z1Q8NGY1 313 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 LUZP4Q9P127 313 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 RBM7Q9Y580 266 aaKnown RBP13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 IGLV3-32A0A0A0MS00 114 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 DHRS7CA6NNS2 312 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 ZNF735P0CB33 412 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 ZNF16P17020 682 aaPredicted RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 MAGEA5P43359 124 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 AKR1D1P51857 326 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 SUMO3P55854 103 aaPredicted RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 HOXA4Q00056 320 aaPredicted RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 RAB32Q13637 225 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 MEF2DQ14814 521 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 TSC22D1Q15714 1073 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 MPPED2Q15777 294 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 OTOGLQ3ZCN5 2332 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 CLEC18BQ6UXF7 455 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 PEG10Q86TG7 708 aaKnown RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 GTPBP8Q8N3Z3 284 aaPredicted RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 SEMA6DQ8NFY4 1073 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 OR56B1Q8NGI3 324 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 SGK3Q96BR1 496 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 MCTS1Q9ULC4 181 aaKnown RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 NOSIPQ9Y314 301 aaKnown RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 HDGFL3Q9Y3E1 203 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 ABCA1O95477 2261 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 MTRF1O75570 445 aaKnown RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 HPNP05981 417 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 HGFACQ04756 655 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 Q0VFX4 171 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 IAH1Q2TAA2 248 aaPredicted RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 C1orf100Q5SVJ3 147 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 DEGS2Q6QHC5 323 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 EIF4E3Q8N5X7 224 aaKnown RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 FN3KRPQ9HA64 309 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 OR5AC2Q9NZP5 309 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 C14orf166Q9Y224 244 aaKnown RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 ATRXP46100 2492 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 HS3ST1O14792 307 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 RCC1P18754 421 aaPredicted RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 CASRP41180 1078 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 DSCR4P56555 118 aaPredicted RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 ZNF385CQ66K41 422 aaPredicted RBP13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 C11orf87Q6NUJ2 197 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 ZNF529Q6P280 563 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 LINC00518Q8N0U6 118 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 LRRC46Q96FV0 321 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 FOXJ2Q9P0K8 574 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 IL36RNQ9UBH0 155 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 PLCE1Q9P212 2302 aa13.62□□□□□ -0.23
CHAF1A-201ENST00000301280 EFSO43281 561 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 CBR3O75828 277 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 BPNT1O95861 308 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 ENDOGQ14249 297 aaKnown RBP13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 TUSC5Q8IXB3 177 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 OR11L1Q8NGX0 322 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 OR10C1Q96KK4 312 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 SIGLEC12Q96PQ1 595 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 EDEM2Q9BV94 578 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 TOX3O15405 576 aaPredicted RBP13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 CER1O95813 267 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 MPLP40238 635 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 TLE1Q04724 770 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 P4HA3Q7Z4N8 544 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 BPIFCQ8NFQ6 507 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 OR5M8Q8NGP6 311 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 OR1S2Q8NGQ3 325 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 OR6K3Q8NGY3 331 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 RDH5Q92781 318 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 CLDN23Q96B33 292 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 PLPPR2Q96GM1 343 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 FOXB1Q99853 325 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 A0A1W2PNV4 684 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 RFPL4AA6NLU0 287 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 RFPL4AL1F8VTS6 287 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 CD74P04233 296 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 DUSP3P51452 185 aaPredicted RBP13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 PMP22Q01453 160 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 ZNF92Q03936 586 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 ZNF239Q16600 458 aaKnown RBP13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 PABPC1L2AQ5JQF8 200 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 CLVS2Q5SYC1 327 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 SLC22A25Q6T423 547 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 SULF2Q8IWU5 870 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 OR13G1Q8NGZ3 307 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 SECTM1Q8WVN6 248 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 AQP3Q92482 292 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 NTNG2Q96CW9 530 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 GUCD1Q96NT3 240 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 MAGT1Q9H0U3 335 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 ST3GAL6Q9Y274 331 aa13.61□□□□□ -0.23
CHAF1A-201ENST00000301280 HEATR1Q9H583 2144 aaKnown RBP13.6□□□□□ -0.23
CHAF1A-201ENST00000301280 EIF3GO75821 320 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHAF1A-201ENST00000301280 NPBWR2P48146 333 aa13.6□□□□□ -0.23
CHAF1A-201ENST00000301280 ZNF169Q14929 603 aaPredicted RBP13.6□□□□□ -0.23
CHAF1A-201ENST00000301280 ANKRD55Q3KP44 614 aa13.6□□□□□ -0.23
CHAF1A-201ENST00000301280 PDSS1Q5T2R2 415 aa13.6□□□□□ -0.23
CHAF1A-201ENST00000301280 PXT1Q8NFP0 134 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms